Pseudomonas stutzeri DSM 4166, PSTAA_2200 (oprN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTCCTGGCCTTCCTGGTGCTGGCAGCGCAGTACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACGCTGCTCTCGGCCATCA CCGGGGTGATCCTGGCCGGTAGCGACAACAACGTCTTCACCCAGATTGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCGATCCTGATCGTCGA GTTCGCCAAGGACAAGCAGGAGGAAGGCATGGACCGGCTCGCCGCCACCCTGGAGGCCTGCCGCCTGCGCCTGCGGCCGATCCTGATGACCAGCTTCGCC TTCATCATGGGCGTGGTACCGCTGGTGCTTTCCAGCGGGGCCGGCGCCGAGATGCGCCATGCCATGGGCGTGGCGGTGTTCTCCGGGATGCTCGGGGTGA CCTTCTTCGGGCTGCTGCTGACCCCGGTGTTCTATCTGGTGATTCGCGCCTTCGTCGAGAAGCGCGAAGCGCGCAAAGCGGTATTCAAGGAGGCCCGCGC
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| DNA Sequence for Gene |
>PSTAA_2200
|oprN
ATGAAGTTCTTCGCCCTTTCCCTGCTCGCCCTGACCATCACCGGTTGCGCCGTCGGCCCGGATTACCGCGCGCCGCAACCGGAGCCGGCGCGGCTGCTTC AGGCCGAGCGCGGCGACCACGACCGCTCGCGCTTCGAGGCGGCCTGGTGGCGGCAGTTCGAGGACCCGACACTGGATGCCCTGGTCGGCGAAGCACTGGC TGAAAACCGCGAGCTGCGTATCGCCTATGCCCGTCTGCGTGCGGCGCGGGCTATTCGCGATGATGTCGGCAATGATCGTCTGCCCACCGTCACCGCAGGT GCGCGCGCCGATATCGGCAAGGCCCAGCAACCCGGTTTCAGCGAAGAGCGGGTGAACGCCGAGCGTTACGATTTGGGCCTGGACATGGCCTGGGAGCTGG ACCTGTTCGGCCGTATCCAGCGCAGCCTGGAGGCCAGCGAAGCGCAGGCCGAAGCTGCCGAGGCCGAGCTCTATCAGCTACAGGTCAGCCTGATCGCCGA ACTGGTGGATGCCTATGGTCAGCTGCGCGGTGCCCAGCTGCGCGAGCGGATCGCTCGCGACAACCTGGCCAACCAGCGCAATTCCCATGAACTGACCGAG CAGCTGCGCGAAGCGGGTGTCGGCAGCGAACTCGATGTGCTACGCGCCGACGCCCGTCTGGCGGCCACCGAGGCGAGCCTGCCACAGCTGCAGGCGCAGC AGACCCGCGCCCGCAACCGCATCGCCACCCTGCTCGGCCAGCGCGCCGATCAGCTCAGCGTCGACCTCTCGCCCCGCGAGCTGCCGGCGATTGCCAAGGC GCTGCCGATCGGCGACCCCGGCGAGTTGTTGCGCCGACGCCCGGACATTCGTGCGGCCGAACGCCAGCTGGCCGCCGCGACTGCAAACGTCGGCGTGGCC ACAGCCGATCTGTTTCCGAGGGTGAGTCTGTCGGGCTTTCTCGGCTTCATCGCCGGACGCGGCTCGCAGATCGGCTCCAGCGCCGCACAGGCCTGGGGCG TAGCGCCCAGCATCAGCTGGGCGGCGTTCGACCTGGGCAGCGTGCGCGCCCGTCTGCGCGGTGCCGAGGCGGATGCCGACGCCGCGCTCGCCGGTTATGA GCAGCAGGTGTTGCTGGCGTTGGAGGAATCGGAAAACGCCTTCAGCGACTACGCCCGCGCTCAGGACCGCCTGTTGTCGCTGCTGCGCCAGTCCACCGCC AGCCGCGCCGCGGCACAGCAGGCGGAAATTCGCTACCGCGAAGGCACGGCGGACTTTCTCGTACTGCTCGATGCCGAGCGCGAACGGTTGCTGGCCGAAG ACGCCCAGGCCCAGGCCGAAGTCGAGCTGTATCGCGGCGTAGTTGCCATCTACAAGGCGCTCGGTGGCGGCTGGAGGCCGAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATCGGCTCTCTCGTTGGATCGCCTCCTGGTCGATCACTTCTGCCCCGGGTGCTGCAACGCCGCGGGGCATTTTTTTTGCCGCTCAGCAGCACCACTCTT TCGTCCGCCTCGCTCTTGAGCGAAGCACGCCGTGCCTGGCTGCCGATAAATGCACCGGCTGGCGCCAGCTTCGTCCCGTTTGTATTGTCGGAGGCGGACA ACAATCCGGACTGACCCAGATGCCCCTAGGAGCGCTCATGAACCCATCCGTGTCCAGCCAGCTCCAGCAGGCACTGGCGCTGCTGCAGCGTTACCTGGGC GGGAACCTGCTGGCCGTGCATCTGTTCGGCTCGGCCGTTGTCGGTGGCCTGAAACCCGGCAGCGATCTCGACCTGCTCGTTACCGTCGCCGCCCCCCTGC CGACAGCCACGCGCCACTCGCTGATGCGCGAGCTGCTGATGATTTCCGCCTGGCCGGCCAACGAGCGAATGCGCCCGCTGGAAGTCACCTGGGTGGTACA
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| Amino Acid Sequence |
>outer membrane protein OprN
MKFFALSLLALTITGCAVGPDYRAPQPEPARLLQAERGDHDRSRFEAAWWRQFEDPTLDALVGEALAENRELRIAYARLRAARAIRDDVGNDRLPTVTAG ARADIGKAQQPGFSEERVNAERYDLGLDMAWELDLFGRIQRSLEASEAQAEAAEAELYQLQVSLIAELVDAYGQLRGAQLRERIARDNLANQRNSHELTE QLREAGVGSELDVLRADARLAATEASLPQLQAQQTRARNRIATLLGQRADQLSVDLSPRELPAIAKALPIGDPGELLRRRPDIRAAERQLAAATANVGVA TADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLGSVRARLRGAEADADAALAGYEQQVLLALEESENAFSDYARAQDRLLSLLRQSTA SRAAAQQAEIRYREGTADFLVLLDAERERLLAEDAQAQAEVELYRGVVAIYKALGGGWRPSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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