Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTGTTCCAGCGCAGCCTGGGCATGGGCTTCGCCGACTGGCGGCGGCAGGTGCAGCTGGCGACCGCCGCCGCCGCACTGATCGATGGCCGTCCGGTGGC AGGCATCGCCCATGCCCTGGGATATACGCCGAGCGCCTTCAGCGACATGTTCCGCCGCGAGCTGGGCGTCTCTCCCACCGAGTACAGGGCCGAGCATCAC CAGCCGTTCCAGCCTTGACCGGTATTCGATAGCGATTGGCCGATAGATGTTTTTTCGGCCAACTAGACTGGCACCATCGTTCACCGTCCCTGTCAGCCGC CATGAACTACCTGATCTCCCTCGGCATCGGCCTGCTGGTCGGCGCGCTCTACGCCGTCCTCGACTTCCGCTCGCCGGCGCCCCCCACCATCGCCTTGGTC GGCCTGCTTGGCATGCAGCTCGGCGAACAGCTTTTCCCCCTTGGCCGCGACCTGCTGCAGCAGTGGCTGCACTGATCGCCGCGACGACACGGAGCCCCCG
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DNA Sequence for Gene |
>NR43_RS10100
ATGAAAGCACTGCAATTCGACCGTACCGGCGACCTCGCCGCCCTCGAGCTGGTGGACATGCCCGACCCGCTTCCCGCCGCCGATGAGGTGCGGGTGGAAA TCCGCGCCGCCGGGCTGAATCCGAGCGACGTGAAGAACGTCCTCGGCCGCTTCCCCTATACCACCCTGCCCCGGGTACCGGGCCGCGACTTCGCCGGGGT GGTGGTGGAGGGACCGAAGGCTCTGCTCGGCCAGGCGGTCTGGGGCACCGGGCGGGAGCCGGGATTCTTCCGCGACGGTAGCCACGCGCAGTTCCTGACC CTGCCGGCCGCCGGCGTCGCGCTCAAGCCGGAAAGCCTGAGCTTCGCCCAGGCCGCCAGTTGCGGGGTGCCCTACAGCACCGCCTGGGATGCCCTGCAAC GCAGCCAGGTCAAGGCCGGCACCCGGCTCCTGGTAATCGGCGCCAACGGCGCGGTCGGCAAGGCCGCGCTGGCGCTGGCCAAGGCCCTGGGGGCCGAAGC GATCGGCGCGGTGCGGCGCGAGGAGCAACGCCAGGCGCTGGAAACGCAGGGCATCGCCGCGCTGCTGCTGGGCGAGCCGGCCGAACTGGCGGCACAGGTG GAAGGGATCTTCCCCGGCGGGGCCGAGGTGATCTTCGATACGACCGGTTTCTGGCTCGAGGCGGCGGTCCCGGCGCTGGCCGCCTTCGGTCGCCTGGCGA TCATCGCCGCACCGGCCGACGGCCATGTGCGCCTGCCGGCGTTGAACCTGTACCGTCGCGGTGGCTCGGTGGTGGGGATCAACTCGCTGCTCTATGGCGT GGAAGCCTGCGCAGGCTTCCTCGACGCCTTCTGCAAGCTGTTCGACCAAGGCCGCCTGCCGCTGCCGGACGGGCTGCGGGAAGTCCCGCTGGAGCAGGGC GTTGAGCAGTACCGGGCGGTGAACGAAGGCACCTGCGAGAAGATCATCCTGGTGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACCAGCGGAATCCCGGCGGAACATACCGGGATTCCGCTGTGCGCAAGGCTACTCCGCGCCGACCGCGAGCTTGCGGGCGCTGCGCGCCTCCTCCAGCT GCATGCAGCGCTCGAGGAACAGGTACATATAGTCGTAGCTCTTGCAGATCGCGTCGCGCAGTTGCCGGCGCAGCTCGGCGCTGGGATTGGTGCCGGCCAG GGTGCAGATGATCTCCAGCGCCTCCCAGGGGTGGGCATCGTCGTACTGGGCGTGGAGCTTGAGCCACTTCATGGCGCGCTTGCGGCCTTCCTTGGGGAAG GCGTTTTCGTAGACGCCGTTCGAACAGACCAGCGCCGACCACTCGCCGGTGACGCCTTCGATGGCGTAGTTGGTGGCGGCCATGGCCACCGCCAGTGAGT CGCTGGCGCAGGTGTGCCAGCACCAGTGGCTGAGCGCGTGCAGTTCGGCCGGCACGTCTTGCGCCTGGATCTCGGCCAGGCTCACGCCGTGGGCCTCGGC
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Amino Acid Sequence |
>oxidoreductase
MKALQFDRTGDLAALELVDMPDPLPAADEVRVEIRAAGLNPSDVKNVLGRFPYTTLPRVPGRDFAGVVVEGPKALLGQAVWGTGREPGFFRDGSHAQFLT LPAAGVALKPESLSFAQAASCGVPYSTAWDALQRSQVKAGTRLLVIGANGAVGKAALALAKALGAEAIGAVRREEQRQALETQGIAALLLGEPAELAAQV EGIFPGGAEVIFDTTGFWLEAAVPALAAFGRLAIIAAPADGHVRLPALNLYRRGGSVVGINSLLYGVEACAGFLDAFCKLFDQGRLPLPDGLREVPLEQG VEQYRAVNEGTCEKIILVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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