Pseudomonas aeruginosa AZPAE14825, NR43_RS06705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCGTGGGTCAGCCAGTGCACCCGCGAACAGCCAGCGGCGCCGGCCTCGGCGTAGACATGCTCGATCAGCCGGCGCCCTATGCCTTCGCCGCGCAGGCC CTCGGCGACGAACAGGTCCTGCAGGTAGCAGTAGTCGCCGACGGTCCAGCAGGAGCGGTGGTAGATCCAGTGCACCAGGCCCACGGCGCGCTCGTCGAGC CAGGCGAGGGCGGCGTTCATCGGTTCGTCGGCGTCGAGGAAGCGCTGCCAGGTGGCGTCGCTGGTAGCGGCGGCGATCTCGGTCTTGTAGAAGCGCTGGT AGCCCTCCCACAGCGGCAGCCAGGCGGCGTGGTCGCCGGCGCCGACGGGACGAATCTGCAGGGACGTGCTCATGGCTCGGTTCCATGTCCGGGTAAAGGT GCCTCCAGACTAGGCCGGGAAATGGTCCGCTAGAAGATCCATTGCTGGTCAATTCCACAGGTCCAATCCACACTGGCGCTTTCTTCCCTCCGAGACCGCC
|
|
| DNA Sequence for Gene |
>NR43_RS06705
ATGGCCACCGTACTGCCCTTCGACGCCGCCGGCATCCACCTCGACCCCGCCCAGGGCCTGGCCCGCCAGCTCTACGCCGCGCTGCGCGAACGGATCCTCG ACGGCCGCCTCGGCAGCCGCACGCGGATGCCCGCCAGCCGCGAGCTGGCCCAGGCCCTGAAGGTCTCGCGCAACACCGTGGTGCGGGCCTATGAACAGTT GCACGCCGAGGGCTATATCGACGGGCGCACAGGCGACGGCACCTACGTTGCCGAGTTGCAGGAAATCCCAGGCAGGGCCCCCGCCGTCGCCCCGAGCGCT CCCGCGCCGCGCGGCCCGGCGGCCCTGGCGCCGCCACCGGAAGGCGCGCCGCGAGCGTTCCGCGTCGGCGTGCCGGCCTTCGACCTGTTCCCCTTCGACA CCTGGGCGCGGCTACAGGCGCGCTTCTGGCGCAACCCACCGGCGGACTGCCTGGGCTACGGCGACCCGGCCGGCGAGGCGCGCCTGCGCGAGCTGATCGC CGCCTACCTGCGCAGCGCGCGCGGCCTGCGCTGCGAGGCGGAACAGGTGATCGTCACCCATGGCGCGCAGCAGGCCATCCGCCTGTGCGCCCAGGTGTTG CTCGAGAACGGCGATCCGGTGGCTGTGGAAAACCCTGGCTACCGCGCGGCGCGCCTGGCCTTCGCCGCGACCGGCGCGGTACCGCACGGGATCGACCTCG ACGCCGAGGGGCTGCGCAGCGACCGGCTCGCGGGCATTGCCGGCTGCCGCCTGGCCTATGTCACGCCGTCACACCAGTACCCCACCGGCGTCACCCTGTC GCTGGCGCGGCGCCTGGAGCTGCTGGAGTGGGCCGAGCGCGCCGACGGTTGGATCGTCGAGGACGACTACGACGGCGAGTATCGCTACAGCGGTACGCCG CTGGCGCCGCTGGCCGCGCTGGACCGACAGGGCCGGGTGCTCTACGTCGGGACCTTCTGCAAGATCGCCTTCCCGGCGTTGCGCCTGGGCTACCTGGTGG TCCCGCCGGCGCTGGTCGAGCGCTTCCGCCAGCGGCGGGCCATCGAGGTACGCCATTCGGAGGTGGGCACCCAGCGGGTCATGGCCGACTTCATCGCCGA GGGGCATTTCCAGCGCCACGTCCGCCGCATGCGCCGCGCCGCCCGCGCCCGCCGCGACGCCTTGCTGCGGGGCTGGCCAGAGGCGCCGGGTTGCCAGCCG TTGCCGGCGGTGGAGGCGGGGCTGCACCTGTGCGTGCGGGTCGACAGCCTGGCGCGGGAGCGGGCCCTGATCGCCGCGGCGGCAGCCGCCGGGGTGGAAG TCAGCGCCTTGAGCGACTACTGGATGGACGACTCCAGCGTTGCGCCAGACGACCGCGCGGGCCTGGTGCTGGGCTTCGCGGCAGTACCCGAGGCGCGTAT CGACGAGGCGCTGCGGGCGTTGCGCAAGGCCTGGCGGCGGGAGGCCCTGGTTGGACCCGTCGTCGCGACTGACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AATGCCCCCGGATCACCCTCGCGCCCAGGAGTAGCCATGAGTGTCGCCCTTTCCGCCGCGCCCGAGCGCAAGCTCGCCGCCCCCCTGATCGCCTTCGCCC TGCTGGTGCTCGGCGGGCTGTTCCTGTTCAACGCGGTCAGTGCGCGCCAGGCCATCCTCTTCATCGTCGGCGGCGCCCTGGGCCTGACCCTCTACCACGC CGCCTTCGGCTTCACCTCCGCCTGGCGGGTATTCATCCGCGAACGGCGCGGCGCCGGGCTGCGCGCGCAGATGGTGATGCTGGCGCTGGCGGTGCTGCTG TTCTTCCCGGCGCTGGCGGCGGGCAGCCTGTTCGGCCAGCCGGTGAGCGGTTTCGTCTCGCCGGTCGGCACTTCGGTGATCGTCGGCGCCTTCATTTTCG GCATCGGCATGCAACTGGGCGGCGGCTGCGCCTCCGGCACCCTGTTCACCGTCGGCGGCGGCAACGCGCGGATGCTGGTGACCCTGCTGTTCTTCATCCT
|
|
| Amino Acid Sequence |
>aspartate aminotransferase
MATVLPFDAAGIHLDPAQGLARQLYAALRERILDGRLGSRTRMPASRELAQALKVSRNTVVRAYEQLHAEGYIDGRTGDGTYVAELQEIPGRAPAVAPSA PAPRGPAALAPPPEGAPRAFRVGVPAFDLFPFDTWARLQARFWRNPPADCLGYGDPAGEARLRELIAAYLRSARGLRCEAEQVIVTHGAQQAIRLCAQVL LENGDPVAVENPGYRAARLAFAATGAVPHGIDLDAEGLRSDRLAGIAGCRLAYVTPSHQYPTGVTLSLARRLELLEWAERADGWIVEDDYDGEYRYSGTP LAPLAALDRQGRVLYVGTFCKIAFPALRLGYLVVPPALVERFRQRRAIEVRHSEVGTQRVMADFIAEGHFQRHVRRMRRAARARRDALLRGWPEAPGCQP LPAVEAGLHLCVRVDSLARERALIAAAAAAGVEVSALSDYWMDDSSVAPDDRAGLVLGFAAVPEARIDEALRALRKAWRREALVGPVVATD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|