Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCGGTGCGGACGATATGCGTGCCCCACGCCAGCAGGGCGACGGCAGAGAGCAGGTCGAGCAGTTTCAGCATGGCGTGGCCCCCCTGGCACTACGACGAA TGGCCAACCTCGCGCCAGGTTCCGCGTGCGTTGCGCCGCGGAGCCCGGACAACGGCGCCAACGGCCACGATGGAAAGGCAGCGTTCAGGCGAGTTGTAAC ACGAACGTCATATTTGGACAGGCGCCCCCCGCGGGAGTTCGTCTCGGCAGCCCGAGCGGCAGGGCGCCTACCCTTCATTCAAGCGTGCGCGCCGGGAAAC GGCGAGGATTTTTTCGCCTTCCGTTCGATGCATGCGTTTGCGCCACAGCCCATGGAATTAGCCGACAGGAAGGGTATCCTTTGCACCTTTTAAAAAGCCC CGGTCTAGAGGGATACAGAGGAGTGGTGCGGATGCGATTTTCGGGGATCAGTGGCTGCCTCTCGGCAGCGGTGTTGGCGCTCGGGGTAGGGGGAGCGCCG
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DNA Sequence for Gene |
>NR43_RS06490
GTGGTTCAGGCCGATGCGCTGGGCGATAGCCTGGAGCAGGCGCACATCCGCAAGGCGACCTTCGCCGCGCCGGCCTGGGAAGGCTATACCAACGCCGACG GCAGCGGTCTGTACTGGGACCTGCTGAAGCAGGTCTATGCGCCCTACGGGCTCGACGTGAAATTCATCAACATGCCCTGGAACCGCGCCAACAAGCTGAT GACCGCGGGCTCCATGGTCGATGGCGTGCCGGGCGAGATCCCCGGCGTTGAGGGCAAGCTGTACGCCCAGTTGCCGATCGACATCGAGTACCACGGCGTG ATGCATGCGGCGAAGACGCCCTTTTCCGGCCGCGCCAGCCTCACCGGCAAGCGCGTCGGCTGGCGCCACAGCTACAACCTGATCCCCGCGGAGCAGCGCG ACTTCACCCTGGTCGAGTGCGTCCGCCCCGAGCGTTGCACCGAGCAGGTCCAGAACGGCGAGCTGGATTTCTTCCTCGACGAGCCGGACGAACTGGAAAA GCAGCGCAGCGAAGCGCATCTGCCGGCCGACGCCTACCCGATCGCGCAACTGCCGCCCGGCAAGGAGTCCTTCATGACCTTCGCCGACAGCGCCAGCGGC CGGCTCCTGCGCGAGGTCTACGACGCGCGGGTACGGCAGATGGCGGCGTCCGGCGAGCTGCGGGCGCTCTACCAGCGCTGGAACAGCGAGGTGCCCGGCG CCGTGCAGGCTCTTTCGGCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCCGCTCATTTCCATCGCGAAGCCTTTCCGGGGCTTGCGCGGTGGGAATGAAACGCCTAGGATTCGCCCTTCATTTCCCCCACTTACGCACCGCAAA GGAGGTTACATCGATGATTCAGTTCTCTACCCTTTGCAGGCTGCGCCTGGCCTAACGGCCACCGAAACCTACCGCTCGACCCCCTGCACCGCTGAACGAT TCCCGCCCTTGCGTCCGCGCAAGCTTCCGGCGAGAGGTCATCGGCTGCCGCGGTCACCGCTCCCCAGGTTTTCACTTCTCCGTTAGACGCCCTTCGCCCT TCCGCGAGTGCCCGCTCGGCTTCGGTCTGCCCCCCGGATCTACCGTTTCAATCACATGGATTGGATTATGGGCAACTACATCAAGCCTTTGTCCGCGGGC GTCGCACTGATCGCCTCGGACAGCACCTGGATCGAAGGCAAGGCGATCCAGCAACTGCAAACCACCGCCGAGCTGGACGGCATGTGCCGCGTCGTCGGTC
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Amino Acid Sequence |
>hypothetical protein
MVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVPGEIPGVEGKLYAQLPIDIEYHGV MHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQLPPGKESFMTFADSASG RLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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