Pseudomonas aeruginosa AZPAE14825, NR43_RS05790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGTCGGCCTGTTTGCCGTGGCGGGCAGCGCATTCGCCGCCAAGCCCTGTGAGGAACTGAAAGCCGAGATCGATGCGAAGATCAAGGCCAACGGCGTTC CTGCCTACACCCTGGAAATCGTCGACAAGGGCAGCGTCACCGACAAGAAGGTAGTCGGCACCTGCGACGGCGGCACCAAGGAAATCGTCTACCAGCGCGG CTGATGCAGCGCCTGCGACGAGCAGTATCCGGGGCCGGCTTTCCCATGGGAGCCGGCCTTTTCTTTTTGCCGCGATGAGTACCCTGCCAACGATGGGTCT TGTTGCAGTTCGTCGAGAAAGCGTGCCATCTAACGGATTAATCCAAAAGTCTGTGTTAGGTTTTTCGGCACGCCCAGATGGCCTTGTGCCTTACTTCCGG ATTGTCCGACTCATGGAAGACGGATTTCGGAATATTCCTGCTTACCCGCTGTAGCCGCTGGGCCAACATCGCGCCTTTCTGTATTTCAAGGAATGAAATC
DNA Sequence for Gene
>NR43_RS05790
GTGGCTCTCCATCGCCTGGCCTTTATCTTCCTGTGCCTGCCGCTCATGGCCAGCGCCGCCCCCTTCACCTCCCCCGGCGACCGCGACCTGATCCGCGACC GCCAGCAGCGCCTGCTGGACGAACAGCGCAAGCGCCTGGAGGAACTCCAGCAACTGCCCGGCAAGGGAGCGCCCGCCGCTGCGGATGCCTCCGGCGACGA CGAGCGCTGCTTCGAGATCCGCCGCATCGAGCTGGAAGGCGCCGGGCACCTCGGCGAAAGCGCGCGTCGCCAACTGCTGGCGCCCTACCAGGGGCGCTGC CTGGGCGTCGGCCAGCTCAATGCGCTGCTCAAGGCCGTCACCGACCATTACCTGGATCGCGGCTACGTCACCACCCGCGCCTACCTGCCACAGCAGGACC TGGCCTCCGGGACCCTGCGCATCATCGTCGTCGAAGGCCGCCTGGAGGGCCTGGACAGCTCCGCGCTGGCCAGCCCGCGCGAACTGGCGATGAGCTTTCC GGGCAGGACCGGCGAGTTGCTCGACCTGCGCGAACTGGAGCAACTGGTCGACCAGTTGAGTCGCCTGCCGTCGCGCCAGGCGCAACTGGAGCTGGTGCCC GGCAGCGAGGTCGGCGGCAGCCGGGTGCGTCTCAAGGGTGAGCGCGACAAGCCCTGGCGGGTCTCCGCCACGCGCAACAACGACGGCGACGTCAGCACCG GCGAGCAGCAGATGGGCCTGGGTCTGGACTGGGACAGCCCGCTGGGCCTGGCCGACCAGCTCAACCTGCGCGCCAACCGCGACGCGGTGACCGACCGCTG GCGCCATTCCGACAGCCAGAGCCTGTTCTACACCCTGCCCTGGGGCTGGTGGACTTTCACCTACGGCTACAGCCAGAGCGACTACCGCACGCGCAACGAG GCCAGCGGCTTCCCCTTCAAGCTCGATGGCGACAGCCGCAGCCATCAGTTCCGCGCCGAACGCGTGCTGCACCGCGACGGCGTGAGCAAGACCGCCATGA GCCTGGGGCTCAGCCACCAGCGCACCAACAACTATGTCGAAGACACCCGCCTGGAAGACCAGAGCACGCGGATCACCGAGACCCAGCTCGGCTTCAACCA CGGTCGGCGGATCGGCAGCGGTTTCGTCAACCTCGACCTCGGCTGGCAGCAGGGCATCGGCGCCCTTGGCGCGCAGGGTCGCGGCCACCCGCAGGCGGGC GATCCGAATGCGCGCTACGACAAGTACAGCCTGACCCTCAGCTACCTGCAGCCGTTCCAGCTATGGGGCGAGCGCTTCAGCTTCGACAGCCTGGCCACCG GGCAGAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAG CGGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAGTGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGAC GTCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCA GCGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGACGCGGCGACCTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTTGCTTAACCTCGCCGGGCCCCTACCCGCCA AGGAGTAACGATATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCTTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGG GGCTGGCGCTGGACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCATCGTCAATATCGCCACGCCCAACGGCGCCGGGCT GTCGAACAACCATTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCCACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATC CTCGGCAACCCCAACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACTGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCG
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLGESARRQLLAPYQGRC LGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVP GSEVGGSRVRLKGERDKPWRVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYTLPWGWWTFTYGYSQSDYRTRNE ASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPQAG DPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYD VGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site