Pseudomonas aeruginosa AZPAE14825, NR43_RS05785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAGC GGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAGTGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGACG TCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAG CGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGAAGACGCGGCGAC CTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTTGCTTAACCTCGCCGGGCCCCTACCCGCCAAGGAGTAACGAT
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| DNA Sequence for Gene |
>NR43_RS05785
ATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCTTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGGGGCTGGCGCTGG ACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCATCGTCAATATCGCCACGCCCAACGGCGCCGGGCTGTCGAACAACCA TTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCCACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATCCTCGGCAACCCC AACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACTGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCGGGCAGTCGGCGC GGGTGATCGTCGCCAACCCGCACGGCATCACCTGCCAGGGCTGCGGCTTCATCAACACGCCGCGCGCGACCCTCACCACCGGCAAGCCGATCATGGACGG CCAGCGCCTGGAGCGCTTCCAGGTGGACGGCGGCGACATCGTCGTCGAAGGCGCTGAACTGAACGTCGGCAACCTCGAACAGTTCGACCTGATCACCCGC AGCGCCAAGCTCAACGCCAAGCTCTACGCGAAGAACCTCAACATCGTCACCGGCCGCAACGATGTCCAGGCCGACAGCCTGCAGGCCACGCCGCGCGCCG CCGATGGCAGCGAGAAGCCGCAGCTGGCGATCGACAGCTCGGCGCTGGGCGGGATGTACGCCGGGGCGATCCGCCTGGTCGGCACCGAGCAGGGCGTGGG GGTGAAGCTGGCCGGCGATATGGCCGCCAGCGGCGGCGACATCCGCATCGACGCCAGCGGCAAGCTGAGCCTGGCCCAGGCCTCCAGCCAGGGCGACCTG AAGATCGCGGCCCAGGCCGTGGAGCTGAACGGCAAGACCTACGCCGGCGGCAGCGCCGAGATCCGCAGCGCGGAGGAACTGGTCAACCGGCAGAGCCTGG CGGCGCGCGAACGCATCGTGCTGGAGGCGGCGCATATCGACAACGCCGGGGTGATCGAAGCCGGCGTCGAGCCAGACGAGCGACGCAACGCGCGCGGCGA CCTCGAGCTGCGCAGCGGCACCCTGCGCAACGCCGGCAGCCTGGTGGCCAGCCGCGCGCTGGAAGCGAAGGCGAGCCAGGCGCTGGACAACCAGGGCGGC AGCCTGAAGGGGGCGACCGTCCGGGTCGACGGCGGACACCTGGACAACCGTGGCGGCAAGCTGCTCGCCGAGGGCGAACTGCGGGTCGAGGCGAGCAGCC TGGACAACCGCCAGGACGGCCTGTTGCAGAGCCGGGACCGCGCCGTGGTCAAGACCCGTGGCGATCTCGACAACCGTGGCGGCCAGGTGATCGGCCTGAA CGACCTGGAGGTCGGCGCGGCGACGCTCGACAACGGCCAGCAAGGCCTGCTCGGCAGCCAGCAGTCCACCCGCGTCAGCGCCCAGGCGCTGGTCAACCGG GGGGACGGCGAAGTCTCCGGCAAGCGCGTCGAGGCCCGCGTCGGTAGCCTCGACAATCGCGGCGGCAAGCTGATCGGCGACGACCTGCTGGTGGTCGCCA GCGGTGCCATCGACAACCGCCTCGGCTTGTTCTCCGCAGCCAACCGCCTCGACCTGCGGGCGCGCAGCCTGGACAACAGCGGCAAGGGCACGCTGAGCAG CCGGGGCGGCCTGGAGGTCAGCCTCGGCGGCCTGCTGGACAACCGCGATGAAGGCAACCTGCTCAGCCAGGGCGCGCAGCGCGTGACGGTGGGGCAACTG GACAACCGCGCCGGCGGCCTGCTGTCGAGCCGCAGCGAGTTGAACGTCCACGGCGCCAGCCTGGACAACCGTGGCGGCGTGCTGGTGGCCGACGCCGGCC TGAGCGCCACGGGAGGCGCCTTCGACAACCGCGACGGCGGCAGCGCCAGCGGCAAGGCTGGCGTGCGCGTGGAGGTCGCCAGCCTGCGCAACGACCAGGG TGGCAAGCTGCTCAGCGATGGCCGCCTGGACCTCGCAGCGAACGCCGTCGGCAACGCCGGAGGGCGTATCGCCGCCAAGGGCGACCTGCAGGCGACGCTT GGCAGCCTGGCCCAGCAAGGTGGCGAACTGGTCAGCGAAAAGACCCTGAAGGTCGCGGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGA ATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGCCGGCGAGATTTCCAGCACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAA CCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGCAGCGCCTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGC CTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGGCGGCTCGACAGCCAGAACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCG CGCTGGTCAGCGAAGGCAGCCTGACGGCGCGCGCCGCGCGCCTGGACAACCGTGGCGGGACCTTCTCCAGCGCCGGTGCGCTGGCGCTGACCAGCCAGGC CGCGCTGGACAACCAGGGCGGCAGGCTGCTCAGCGATGCCGGTGTGACGCTGAAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAG GGCGCGGTGGATATCCGCACCGGCGTACTGGACAACAGCCGCAACGGCGGCATCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGGCTGGACAACG GCCAGCAGGGCCGGGTCAGCGCCAAGGGCCTGCTCGACGCCAACCTGAAAGGCCTCGACCAGCGCGGAGGCGGCGTCCTGGTCAGCGAAACCGGCGTCAC CCTCGACCTCAATGGCGGCACGCTGGTCAACCGCGACGGCGGCCTGATCGCCACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGC GCCGGCGGGGAAATCTCCAGCGACCGCGCCTTCACCCTCGCCGCCGCCAGCCTGGACAACCGCGGCGGGCGCCTGATCGGCGCCGACAGCCTGACCCTGC GCATCGCCCAGGCCCTGGACAACAGCCTGGCCGGGGTGATCTCCGGCACCGCCGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCAC CCTGGCCAGCCGCGCCGGCATCGACCTGCGCGTCGACGGCGCGCTGGACAACCACGCCGAAGGCACCGTCTCCGGCGCCCGCCTGACGCTCGCCAGCGCC TCGCTGGACAACAGCGGCAAGGGCCTGCTCTCTGGCGACGCCGGCCTGACCGTCGTCACTGGCGCGCTGGACAACGCCGAGGGTGGCCAACTGATCAGCC AGGGCGTGCTGGACGTCAGCAGCGCCGACCTCGACAACCGTGGCGGCGCCCTCAGTGGCAAGCAGTCGCTGCGCCTGAGCGCCGCCAACCTGGACAACCG TGGTGGCCTGCTCACCAGCGACGGCGAACTGGAACTGACGGCAGGGCGCGTCGATTCCGCCGACGGCGGCGAAATCTCCGCCCGGGGCGACCTGCGCCTG ACGGTCGAGCGCCTGGTGCAACGCCAGGGCCGGCTGGTCGGCGAGCGCGGCGTCAGTCTCGACCTGCGGGGTGGCGACCTGGATAACCAGGGCGGCCTGA TCAGTGCCCGCGGCCCGCTGAGCATCGAGCGGCTGAACGTCCTCGACAACCGCCAGGGCGGCGAGATTTCCAGCCAGCAGGGCTTCGAGCTGCTGGCCAG GCGCATCGACAACGGCCAGCAGGGGCGCATCATCAGCGCCGGGAAACTGCGCTTGGACGCCGACGCGCTGGGCAACGCCGGCGCCGGCCTGCTCTCCGGA TGGCAGGGCCTGACGGTGACAGGCGGGAGCCTGGACAACAGCGCCGGCGGCACCCTTTCGAGCAAGGACGGCGAGCTGGCCATCAGCCTCGGCGGCGCGC TGGACAACCACGGCCAGGGCGCCCTGGTCAGCAAGGGCGCGCAACGGATCGACGCCGCCAGCCTGGATAACGCCCAGGGCATCGTCTCCGGCGAAAGCGA CGTGACCCTGAGCATCGCCGGGAAGCTGGACAACGGCCAGGGCGGCCTGGTCTCGGCGCAGCGCGCGCTGAGCTTCGAGCGCGACGATACGCTGCTGAAC AACGCCGGCGGCCGGATCAACGGCGGCAGCCTGCTGCTCAAGGGCGCCAGCCTGGATAACAGCGACGGCCAGTTGATCAGCCAGGGCCGGCTCGACGCCA TCCTCGGCGGCGCCCTGGTCAACACCGGCGCGGCGCGCCTGGCCAGCGGCGGCGACCTGCTGCTGCGCAGCGCCAGCGTCGACAACCGCGGCGGCAAGCT GGTCAGCCAGGGGCTGCTGGAGATCAGCGCCGGCAGCCTCGACAACAGCGCCTCCGGCACCCTCGCCAGCCAGGCCGACATGAGCCTGCGCCTGGTCGGC GGCGCCCTGCGCAACCAGCAGGACGGCCTGATCTTCAGCCAGGCCGGCGCCCTCGAGGTGCAGGCCGGCAGCCTGGACAACCGCCAGGGCACGCTCCAGG CCCAGGGTGACAACCGGCTGCGTATCGGCGGCGCGCTGGACAACCAGGGCGGCCGCCTGGACAGCCGGGCCGGCAACCTCGACCTGCAGAGCGGCAGCCT CGACAACGGCGCCGGCGGCGTGCTCAACAGCGCCAAGGGTTGGCTGAAGCTGGTCACCGGGCTGTTCGACAACAGCGCCGGCGTCACCCAGGCGCAGTCG CTGGAGATTCGCGCCGGGCAAGGCGTGCGCAACCAGCAGGGCCATCTCTCGGCGCTGGGCGGCGACAACCGCATCGTCACCGCCGACTTCGACAACCAGG GCGGCGGCCTCTACGCCAGCGGCCTGCTCAGTCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGCCAGGGCGGCAAGGTCGGCGCCGGGCG CATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCGCCGCGATCGACAACAGCGGC GGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGCTGGTTGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGAAAGCGCCAACCAGGACCTCG ACCTGCAACTGGGCAGCCTGGCCAACGCCGGTGGGCGCATCCTCCACACCGGCAATGGCACCTTCGGCCTGGATTCCGGGCAGGTGATCCGCGCCGGCGG CGAACTGACCAGCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGAACCTGGACATCGGCACCTTC CGCCAGACGGCCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCTGGCCAGCGACGGCAGCTTGC GCCTCGAGCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCCTGAACGCCGCCAGCCTCGACCTCGGCAATGCCGCCAG CCTCGCCGGCGGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGC CTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGA CCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCCGGCAACCGTGCCGCCAGCCT GCGCAACCTTTCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTG TACACCGCGAAGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACA AGACCGAGGTCACCGCCAGCAGCGCCATGGGGCAACTGCTGGCTGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGCCTGATCGG CAGCGGCGGCAACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGC GGCGATATCGGCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGAGCGAGATCCCCG CCGCGCTCAACGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGT GATCCAGGCCGCCGGCGACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTG GGCGACAGCGCGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCC TGCCCGGCTTCAGCCTGCCCCAGGGTGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCTGGCGC CGACCGCACCCAGGGCGGTAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCCGGTACCTGGCAGGGCCAGGGCGTGCGAGTCGACGGCCTG GCTGGCGCGGCCAACGTCCAGGGTCAGGGCGGCAGCACGCTCGGCGGTAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGTACCCGGCAACGCCACGCCGA GCGCCAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCTCAACTCGGACTACTTGCTCAGCGGCCTGGGCATGAACCC GGACGCTAGCAAGAAGCGTCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTG AGCAGCGACGAGGCGCTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACCAACTGCACCTG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
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| Amino Acid Sequence |
>hemagglutinin
MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPIVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNP NLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITR SAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVKLAGDMAASGGDIRIDASGKLSLAQASSQGDL KIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIVLEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGG SLKGATVRVDGGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNR GDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQL DNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATL GSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLS LDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVTLKGASLDNSRSGVISAK GAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNG AGGEISSDRAFTLAAASLDNRGGRLIGADSLTLRIAQALDNSLAGVISGTAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASA SLDNSGKGLLSGDAGLTVVTGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRL TVERLVQRQGRLVGERGVSLDLRGGDLDNQGGLISARGPLSIERLNVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSG WQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLN NAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNTGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQADMSLRLVG GALRNQQDGLIFSQAGALEVQAGSLDNRQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQS LEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSG GSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTSNGLLDIRASEWTNSSVLQAGRLNLDIGTF RQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSLRLELSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAAS LNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGL YTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARG GDIGGIDQKSRNFTNLYWYQSANFDPARASEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQV GDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGL AGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDASKKRLGDGLYEQRLIRDAVVARTGQRYIDGL SSDEALFRYLMDNAIAYKDQLHL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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