Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTGGCGAACTCAGCCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCCACGGGTC GAGGTGGCGCGGCGATGAGGCGCGCGCGTGGTTTCACCCTGCTGGAAGTGCTGGTGGCCCTGGCGATCTTCGCCATGGTCGCGGCCAGCGTGCTCAGTGC CAGCGCGCGCAGCCTGCAGAACGCCTCGCGGCTGGAAGACAAGACCCTGGCGATGTGGATCGCCGACAACCGTCTCAACGAATTGCAACTGGAACAGACG CCGCCCTCCAGCGGCCGCAACCAGGGCGAGCTGGAGTTCGCCGGGCGCCGCTGGGAGTGGCGCACCCAGGTCGACAGCACCGCCGAGCAGGATATGCGGC GGGTGATCGTCTGGGTCGCGGCGAAGCCCCTCGGCCGCGAGCGTGGCAGCATCGAGGAACGCGCCGCAGCGCGCCTCGTCGGTTTCCTCGGGAGCCAGCC
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DNA Sequence for Gene |
>NR43_RS21520
ATGAGGCTACAGCGGGGCTTCACCCTGCTCGAGCTGCTGATCGCCATCGCCATCTTCGCCCTGCTGGCCCTGGCCACCTACCGCATGTTCGACAGCGTGA TGCAGACCGACCAGGCGACTCGCGTGCAGGAGCAGCGCATGCGCGAGCTGGTGCGGGCGATGGGCGCCCTGGAGCGCGACCTGACCCAGGCGGTCGAACG TCCGGTACGCGACGAACTGGGCGATAACCGTGGCGCCTTCCTCAGCGAGGGCGAGAACGACCAGATCGTCGAATTCACCCGTGGCGGCTGGCGCAACCCG CTCGGCCAGGCGCGCTCGCGCCTGCAGCGGGTGCGCTGGTCGCTGTCCGGGGAGACCCTCGAACGCCGCTACTGGCTGGTTCTGGACCGCGCCCAGGACA GCAAGCCACGGGTGCAGCAGGTGCTGGACGGGGTTACCGCGCTGAGCTGGCGCTTCCTCGACAAGGAGCACAACTGGCAGGGCCACTGGCCGACCGACGA AGGCAGCGAGGAGGAGCGCCTGGAAAGCCTGCCGCTGGCGGTGGAGATGACCCTGGAGCACCGCCACTACGGCAAGCTGGTGCGCGTCTGGCGTCTGCTC GATCCGCCGCTCAAGCAGGACCAGCCGCAGGGCCAGCCGGGCGGCGAGAATGGCGAGAACGGCGAGGGCGGGGTGCCGCAGCCGCCGGAAGGCATGCCGG GGGCGCCGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCGGGCAGAGCGGCGTCGCGCTGATTACCGTGCTGCTGGTGGTGGCGGTGGTGACCATCGTCTGCGCCGGGCTGATCATCCGCCAGCAGTTGGCGAT ACGCAGCAGCGCCAACCAGTTGCACGTGCGCCAGGCCTGGCACTATGCGCTGGGCGGCGAACGCCTGGCGGAAGCGGTGCTGCGCCGCGACCTGCGCCAG GGCGGCGAGAATACCCGCGAGCCGGTGGACCACCTGGGCGAGGCCTGGGCGCGACCGATGACGCCGTTCAAGCTGGACGACGGCGGCGAGCTGCGGGTGC GGATCGAGGACCCCAGCGGGCGTTTCAACCTCAACGGGCTGGTGCGCAAGCGCAAGGTCAAGCCGGATTCGGTGAAGCAGTTCCGTCGCCTGCTGGCCAC CCTGGGGATGAAGGAAGAGATCGTCCAGGGCTTGCCGGACCGGCTGGCCGACTGGCTCGACGCCGACCAGAATCCGCAGGGCGAGCAAGGCGCCGAGGAC
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Amino Acid Sequence |
>general secretion pathway protein J
MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNP LGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLL DPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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