Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACGTACCGCTGCTGGCGCACATGCTGTTCTGGTACTTCGCCGCGCCGGAATGGCTACCCGAGGACCTCAAGGCCTGGCTCTACGCCGGCAACATCG AGGCCGCCAGCGCTATCGTCGCGCTGACCCTGTACACCGCCGCGTTCATGAGCGAGGACATGCGCAGCGGCATCCGCGCGGTGCCCACGGTGCAACTGGA GGCCGCCCGCGCGCTGGGCTTCGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCCTTGCGGATCACCGTACCGCCGCTGATCTCGCAAACC CTCAACCTGTGGAAGAACACCAGCATCGCCACGGTGATCGGCGTCGCCGAGCTGATGTACCAGGCCGGCCAGGTGGAGAGTTCGACCTTCCGCAGCTTCG AGTCCTTTGCCTTCGCCACCGCGGCCTATCTCAGCGTATCGCTGCTGATCACCGGCGCCGCCGCCTGGTACCAGCAGCGCTATCCGGGAGTCGAACGGCG
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DNA Sequence for Gene |
>NR43_RS19335
ATGACCACCCTGGAACTGATCGATAGCTACTGGCTGTACTTCCTCGTCGGCCAGTACCCCAACGGGCCGTTGGGCGGGCTGGCCCTGACCCTGGTCCTGG CCTCGCTGGCGCTGCTGCTGGCGCTGCCACTGGGCATCCTGCTCGGCCTGGCGCGGGTCAGCCCCTGGCGCTGGCTGCGCTGGCCGATCACCGCGCTGGT CTTCGTGGTGCGCGGGGTGCCGTTGCTGATGGTGATCTTCTGGGCCTATTTCTTCCTGCCGACACTCACCGGCCAGCGCACCGACCAGTTCACCACCATG CTGCTGGCGCTTGTGCTGTTCGACGCGGTGTACCTGGCCGAGATCGTCCGCGCCGGCATCCAGGGCCTCGACCGTGGCCAGTTCGAGGCGGCGCGTTCGC TCGGCCTGGGCTACCTGGCGAGCATGCGCCTGGTGATCCTCCCGCAGGCGCTGCGCAACATGCTGCCGTCGTTGGTCAACCAATTCGTCTCGACGATCAA GGAGACCTCCCTGGGCTACATCATCGGCCTGGCCGAAGTCAGCTTCATCGCCTCGCAGATCAATACCCAGGTATTCACCCTGCCGACCCAGGTCTACCTG ATCCTCGGCCTTACCTATTTCATCCTGTGCTTCGGACTGTCGCGTTTCGCCTTCTGGCTCGAACGCCGCCAGGCGCAGCGCGGCAATCCCAAGGAGGCCC GATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGGCTGGAAAAGGTCAACAAATGGTACGGCGCCTACCACGCCCTGGCGGATGTCGACGAACAGGTCGGCCGCGGTGAGGTGGTGGTGGTCTGCGGACC CTCGGGCTCCGGAAAATCCACCCTGATCCGTACCCTGAACCGCCTGGAACCGATCCAGGGCGGGCGCATCCTGATCGATGGCCAGGACATCCACGCTCCC GGCCTGGACCTCAATCGCTTCCGCTCGCACATCGGCTTCGTGTTCCAGCAGTTCAATCTGTTCCCGCACCTGAACGTGCTGGACAACTGCACCCTGGCGC CGCTCCGTTTGCGCGGCCTGAAACCCGCGGAGGCACGCCGCCAGGCCATGGCGCTGCTGGAGCGGGTCGGCCTGGCGGACAAAGCGGCGGCGTTCCCCGC GCGGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGATGGAGCCGCCGCTGATGCTGTTCGACGAACCGACCAGCGCCCTCGAC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MTTLELIDSYWLYFLVGQYPNGPLGGLALTLVLASLALLLALPLGILLGLARVSPWRWLRWPITALVFVVRGVPLLMVIFWAYFFLPTLTGQRTDQFTTM LLALVLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVSTIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYL ILGLTYFILCFGLSRFAFWLERRQAQRGNPKEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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