Pseudomonas stutzeri DSM 4166, PSTAA_1321
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCACGATGCTGGTCATGGGCTTGGCTGATGGTCCTGGCTGATGGCTGGCATTGTTGCATTCGAAGCCTTTCGGCGTCCGCCGTTCCAAGCGGCGAGAT GCAAGCGGAAATTGCAGAGGCTGCGCGACAACCTCATGGTTGCGCGATGTTCGACCTTGGACTAACCTCCGCGTCGCCTCAGGTGCCCCTGGCCTTGTGC CAGACGGGTGAAACAGGGAAGCCGGTCCATTCTCACGAAGATTCCGGCGCTGCCCCCGCAACGGTAGGCGAGTCGAGAAACCGCAACGGCCACTGTGCAT GACGCATGGGAAGGCGCGGTTTCGGGATGCCGCAAGGCATACGCTCGCAAGCCCGGAGACCGGCCTGTCGCATTTCACTGACAGTGCGGCGGGCGCTGGG CGGGTGCGTATCCCTCGCGGTATTCACTTCCTTTTGCGGTTCCTCCGTCTGTCTTCGTCGACTTTCAGTCGTGCGGGTGGGCACGACGGAGACCTGAACC
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| DNA Sequence for Gene |
>PSTAA_1321
TTGACTGGCAAGCCCCGTTTCAAGCCAGCGGCCTATGTGCTGCTCGGCAGTTTTCCCTTTTCCATTGGCCTACTGGCCGCAGCCCCGCTGGACCTCGAAC AGCAGGTGGTGACCGCCACCCGTACCGCGCAAACCGCCCAGCAGAGCCTGGCCGCAGTCACCGTGCTGGACCGCGAGCGCATCGAGCGCAGCCAGGCGGC TTCGTTACCCGAGCTGCTCAAGCAGGTGCCTGGCGTTTCGCTGGCCAACAACGGCGGGCCTGGCAAGTCCACCGCGCTGTTCATGCGCGGCACCGAGTCC GACCACGTGCTGGTGATGATCGACGGTATCAAGATCGGCTCGGTGTCCGCCGGCGGGGCGGCCTTGCAGGATCTGCCACTGGAGTTGATTGAACGTATCG AGGTGGTACGCGGCCCGCGTTCCAGCCTGTACGGCTCGGAAGCCATCGGCGGGGTGATCCAGATCTTCACCCGCAAGGGCCAGGGGCAGGGCGTCAAGCC GTTCTTCTCCGCCGGCTACGGCACTCATGACACCTACACGGGCAGCGCCGGCGTTTCCGGCGGCGACGGCCGTGGCTGGTACAGCCTGGGCGTCAGCGGT TCGGACACCGATGGCATCAATGTGAAGTCGGCAGGCACCAGCGGTTATGAAAACGATGCCGATGGCTATCGCAACCTGTCTGCCACGCTTGCCGCCGGCT ACCGCTTCGACAATGGCCTGGAGCTGGACGCCAACCTGCTGCAGGCCAAATCGCACAACGATTACGACAGTGTGAACAGCCGACGCACATCTGGCTTCGG CGCCAATGCCGATGGAGAGTCGAAGGTGTTCGGCACGCGCGCGCGCTTCAGCCCACTGGAGCCCTGGCGGGTAACCCTGCAGGCCGGGCGCAGCGAGGAC AAGTCCGATGCCTATCAGGACGGGCGATTCAGCTCGCGTTTCGACAGCCGTCGCGACTCGCTGGCCTGGCAGAACGACATCGACATCGCCGCGGGCCACA TGCTGACGGTAGGCGCCGACTACCAGCGCGACGAGATCAACGGCACCACAGCGTACGCCGAGGATTCGCGCGACAACTTCGGGCGCTTCGTCCAATACCT GGGCGAAGTCGGCCGCCATGATTGGCAGCTGTCGCTGCGCCGGGACGACAACGAGCAGTTCGGCCAGCACGACACCGGCAACATCGGCTACGGCTATGCG CTGACCGACTGGCTGCGCGGCACCATCAGCTACGGCACGGCATTCAAGGCACCGACCTTCAACGAGCTGTATTTCCCCAACTACGGCAATCCCGAGCTGA ATGCGGAAACCTCCGAGAGCCTCGAGGTCGGCCTTGCCGGGCAGCATGTCTGGGGCCACTGGGCAGTGAATGCCTATCGCACCGTAGTGGATGACCTGAT CGCCTATGACGCCAGCATCTCCGCTCCGGCCAACGTGCAGGAAGCGCGCATCCGTGGGGTCGAGCTGGTGCTCGGCAGTCGATTGCTCGGCTGGGACTGG AATGCCAACTACAGCCTGCTGGAACCGGAGAACCGCTCCGCCGGCGCCAACCGCGGCAACGAACTGGCGCGCCGGGCCAAGCAGCTGTTCAACCTCGATG TCGACCGTCGGCTCGGTGCCTTCAGCGTCGGTGCCAGCCTGCACGCCGAAGGGCAGCGCTACGACGACCTGGCCAACACCCGCGAGCTGTCCGGCTACGC CACCCTCGACCTGCGTGGCGAATACCGCATCACCCCGGAGTGGCGTCTGCAGGCGCGCGTCGCCAACCTGCTGGATGCCGACTACGAGACCGCGGAGGGC TACAACCAGCCCGGCCAGGCGGCCTACCTGACGGTGCGCTACCAGGCCTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTGCGGCGCGGGCATGTCGCCCGCGTCCAACAAAGGAGACTGCAATGATCAAGCTTGCCCCGAGATACCAGCTGCTGGTGGGCCTTGCGCTCGCTGCG CTGCTGGCCATGACCCGCGGACAGCACTTCGCCAGCGTCAACCTGCCCAGCGCGTCCTGGGCGGTGTTCTTTCTCGCCGGTGTGCTCGTACGACCGAAGT GGGTGTTTCCGGCACTGTTTCTCGAGGCGTCGCTGTTGGATTTCGCCGCCATCCAGTGGGCCGGTGTCAGCGACTGGTGCATGTCGCCGGCCTACTGGAT GCTGGTGCCGGCATACGGTTCGCTGTGGTTGGGCGGGCGCCTGTATGCCCGCTGGCATCGCGACCAGTTCAGCAGTCTGGCGACCCTGGCCCTGTGCGTG ATGGTCAGCGCCTTCGTCTGCTACCTGTTCTCCGGCGGCGGCTTCCTCTATTTCTCCGGGCGCTACCCGGAGCCGACGCTGGCTCTGCTGGTCGACCGAA
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| Amino Acid Sequence |
>TonB-dependent receptor
MTGKPRFKPAAYVLLGSFPFSIGLLAAAPLDLEQQVVTATRTAQTAQQSLAAVTVLDRERIERSQAASLPELLKQVPGVSLANNGGPGKSTALFMRGTES DHVLVMIDGIKIGSVSAGGAALQDLPLELIERIEVVRGPRSSLYGSEAIGGVIQIFTRKGQGQGVKPFFSAGYGTHDTYTGSAGVSGGDGRGWYSLGVSG SDTDGINVKSAGTSGYENDADGYRNLSATLAAGYRFDNGLELDANLLQAKSHNDYDSVNSRRTSGFGANADGESKVFGTRARFSPLEPWRVTLQAGRSED KSDAYQDGRFSSRFDSRRDSLAWQNDIDIAAGHMLTVGADYQRDEINGTTAYAEDSRDNFGRFVQYLGEVGRHDWQLSLRRDDNEQFGQHDTGNIGYGYA LTDWLRGTISYGTAFKAPTFNELYFPNYGNPELNAETSESLEVGLAGQHVWGHWAVNAYRTVVDDLIAYDASISAPANVQEARIRGVELVLGSRLLGWDW NANYSLLEPENRSAGANRGNELARRAKQLFNLDVDRRLGAFSVGASLHAEGQRYDDLANTRELSGYATLDLRGEYRITPEWRLQARVANLLDADYETAEG YNQPGQAAYLTVRYQAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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