Pseudomonas aeruginosa AZPAE14825, NR43_RS15480
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGCGGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCG CCGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGTTCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGGCGATC GATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGACACTCGCCGGATCGCTCCGGCACCATCCCGAAGATGCCACCCCCGTCGT CGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCCCGCGCACGAACCCTCCCGGAGGCTCTCCCGGGAACTTCGCGCAGCCCCCTCCAGGCCCCGTC CGGCCAGGCCTGGAGGTGCCCGGCCAAGCATGGATTTCTCCCCGCTGGCAACATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCC
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| DNA Sequence for Gene |
>NR43_RS15480
GTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGCAGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGA AAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACCGCGCCCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGA AAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGCCAAAGAAGGCCGGGACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAG CCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCAAGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCA TCCATGACCTCGGCTTCCCCTACTGCACCCCGATCCAGGCGCAGGTACTGGGCTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCCCAGACCGGCAC CGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACCCCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATC GCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGACCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACT TCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGCCACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCT GGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAG GGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGAACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGC CGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGGCAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCACAGAACAACTG GGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAGGAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGAC GTACCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGATCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCG ACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAGGACCCGGACGACTACGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTC GATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAACTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTC AAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCTT GCCCGGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGGGTCAAGACTTCGCCCTACATCGTCCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRPPRADNESGAPRAAEKAEKGEKPAKPAAKEGRDAKPRSDKPRRERKPK PVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALII APTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK GERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGD VPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELL KPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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