Strain | Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACGCCTGGCGATCTTCGACGTCGACGGCGTGCTGACCGACGGCAAGCTGTATTTCCTCGTCGACGGCAGCGAGTTCAAGACCTTCAACACCCTGGACG GACATGGCATCAAGATGCTCATCGCCTCCGGCGTGCGCACCGCCATCATCACCGGCCGCGACACTCCGGTGGTCGAACGGCGCGCGCGCAACCTGGGCAT CCAGCATCTCTATCAGGGCCGGGAAGACAAGCTCGCCGTCCTCGACGAACTTCTCGGCGAACTCGGACTAGGCTATGAGCAAGTCGCCTACCTTGGCGAC GACCTGCCCGATCTGCCGGTGATCCGCCGCGTCGGCCTGGGCATGGCGGTAGCCAGTGCCGACCCGTTCGTGCGCCAGCATGCCCATGGCGTCACCGCGG CCCGCGGCGGCGAAGGCGCCGCCCGCGAGTTCTGCGAACTGATCATGCGCGCCCAGGGTACGCTCGAAGCCGCCCAGAGCGCCTATCTGTAGAGCCAACC
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DNA Sequence for Gene |
>NR43_RS12530
ATGCCGAAGACACTACGCCAGAAACTGCTGCTCGCCCTGATCGCCCTGTTGCTGATCGTCGCGGGCTACTACTGGAACGTCGGGCTCGAGCTGTTCAACG AACAGCCGACCCGTCCCGGCCAGGACAATACCATCGACTACTATGCCGAGAATGCCCATAGCCTCCAGTACCAGGAGGACGGCAGCCTCGACTACGAGAT GACCGCGGTGAAGCTGGAGCACCAGAAAGCCACGGACATCACTTTCGTCACCACCCCCGACCTGCTGCTCTTCCGTGGCAACGTGCAACCCTGGCACATC CAGAGCGCCCGCGCCGAAGTCGGACCGAAAGGCAAGGAGGTCGAACTCATCGACGACGTGCGCGTCGCACGTACCGATGCCAAGGGCCAACCAAGCATCC TGACCACCACTCGGCTGACCGTATTCCCCGACAAGAATTATGCACAGACCGAGCAAGCCGTTAAAATCGACGCGGCCAATGGAGTGACGACGGCTGTTGG AATGAAAGCGTATCTGAAAGACAGCCGGATGCACCTGCTGTCCAACGTAAGAGGTCAGCATGAGGTTCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACCCTCCCCCTTATTTTCGGTCTGACTGCCGCCCTCGGCAGCTCCATGGCCTTGGCCCTGCCTTCGGACCGCGAACAACCGATCCGCGTCCAGGCCGAC AGCGCCGAACTGGACGACAAGCAGGGCGTCGCGGTCTACCGCGGCGACGTCGTGGTGACCCAGGGCAGCACCAAGCTGACCGGCAACACCGTGACCCTGA AGCAGGACAAGAACGGCGACATCGAGGTCGTGACCTCGGTCGGCAAACCTGCCTACTACGAGCAGAAACCCGCTCCGGACAAGGACGTGACCAAGGCCTA TGGCCTGACCATCCAGTACTTCGTCACGCAGAACCGGGTCGTGCTGATCGACCAGGCCAAGGTGATCCAGGAAGGCAACACCTTCGAAGGCGAGAAGATC GTCTACGACACCCAGCGCCAGATCGTCAACGCGGGTCGTGCCACCGGCTCCCAGGTGACCAGCCCGCGCCCGCGCATCGACATGGTTATCCAGCCGAAGA
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Amino Acid Sequence |
>hypothetical protein
MPKTLRQKLLLALIALLLIVAGYYWNVGLELFNEQPTRPGQDNTIDYYAENAHSLQYQEDGSLDYEMTAVKLEHQKATDITFVTTPDLLLFRGNVQPWHI QSARAEVGPKGKEVELIDDVRVARTDAKGQPSILTTTRLTVFPDKNYAQTEQAVKIDAANGVTTAVGMKAYLKDSRMHLLSNVRGQHEVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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