Pseudomonas stutzeri DSM 4166, PSTAA_1221 (pcaB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0019619	3,4-dihydroxybenzoate catabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02426	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48557	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psr00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psr01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psr01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psr01220	Degradation of aromatic compounds	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:1.10.40.30:FF:000007	Adenylosuccinate lyase	-	-	366	447	8.9E-23
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	148	166	9.5E-26
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	278	294	3.3E-12
Pfam	PF00206	Lyase	IPR022761	Fumarate lyase, N-terminal	16	303	1.7E-68
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	278	294	9.5E-26
PANTHER	PTHR43172	ADENYLOSUCCINATE LYASE	-	-	6	451	4.0E-118
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	102	124	3.3E-12
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	233	257	3.3E-12
SMART	SM00998	ADSL_C_2	IPR019468	Adenylosuccinate lyase C-terminal	366	445	7.1E-31
NCBIfam	TIGR02426	JCVI: 3-carboxy-cis,cis-muconate cycloisomerase	IPR012789	3-carboxy-cis,cis-muconate cycloisomerase-like	8	346	0.0
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	143	163	3.3E-12
Pfam	PF10397	Adenylosuccinate lyase C-terminus	IPR019468	Adenylosuccinate lyase C-terminal	367	444	1.5E-20
SUPERFAMILY	SSF48557	L-aspartase-like	IPR008948	L-Aspartase-like	8	448	1.04E-124
FunFam	G3DSA:1.20.200.10:FF:000014	3-carboxy-cis,cis-muconate cycloisomerase	-	-	1	363	0.0
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	103	121	9.5E-26
CDD	cd01597	pCLME	-	-	8	447	0.0
Gene3D	G3DSA:1.20.200.10	Fumarase/aspartase (Central domain)	-	-	2	361	1.2E-119
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	233	260	9.5E-26
Gene3D	G3DSA:1.10.40.30	-	-	-	365	452	4.5E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.