Pseudomonas stutzeri DSM 4166, PSTAA_1122 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGGCCCTGATTCAGAACTTCGAAGAGCACCATGTACCACCACTGGACGAGAAACAGCAGCAGTGCGCCCAGCCCCATGCCGAACTTGCCAAGCAGTCC GAGCGTAAAGAAGAGGGTCAGTAGCAGGGCGCCGCGAATACCCAGGTCGATGGTGAAGGCGAGCGCGCGCGGAACGAGACCGGCCGGGCGCAACACCAGG TCGATGCCCTCTGGGGTTTCCACGCGATGGCTGGTGTCGAGCAGGGCTTGGCGGTCGATGTTCGATGGCAAGGGCAAGGTCGTCTAGGGTCAGGCAGAAG CTGATGCTATGCGGCAAGCACGGCTGCGGCAATGCGCGCGATGGTCAGATGACCCGCCGGGCGCCGAAAGTGGGACGGATTATGGCGAAATGCCTGCTTC CTTGCAGGATGCCGTTCGCAGAGCAGGGCACCTTCCTGACTCACCGCGATGGCCATGTCGCAGCTGTTAGACTGCTGTGCTGATCGAGAAGGACTCTCCC
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| DNA Sequence for Gene |
>PSTAA_1122
|sbcB
GTGACTCCAAGCATCTTCTGGTACGACTTCGAAACCACAGGCATATCGCCCAGCCGCGACCGCCCCTTGCAGGTTGCCGGTATCCGCACCAACGAGGCGC TCGAGGAAATCGGCGAGCCGCTGAACATCTACTGTCGTCCCGGCGACGACATCCTTCCCCATCCCGCCGCGTGCCTGGTCACGGGAATCACGCCTGCAGT TCTGCAGCAGAAGGGGATGTGCGAGGCCCAGTTCGTTCATCATCTGCATCGGGAATTGTCGACTCCCGGAACCTGCGGCGCCGGCTACAACAGCCTGCGT TTCGACGACGAAGTGACCCGCTACAGCCTGTACCGCAATTTCTACGATCCGTATGCACGCGAATGGCAGGGCGGCAACAGCCGTTGGGATCTGATCGATC TGGTGCGTACAGCCTATGCGCTGCGCCCGGAAGGAATTGGCTGGCCGGAAGACGACGGGCGGGTGACGCTCAAGCTCGAGCGTTTGAGTGCCGCCAATGG GCTGGAACATCTGAACGCCCACGACGCGCTGTCCGATGTGCGCGCCACCATTGGCCTCGCCAGGCTCATTCGTGAGCGGCAGCCGCGTCTGTACGAATAT CTCTTCAATCTGCGTCGCAAACATGCGGTGCTCGAGCAGGTCACCCTGCTGGAGCCGCTGGTGCACGTGTCCGGACGCTTCTCGGCTGCCCGGCATTTCC TCTCCGTGGTGCTGCCGCTGGCCTGGCATCCGCGCAACCGCAATGCGCTGATCGTTTGCGATCTGCAAGCCGAGGCGCGGCCGTTATGGCTGGAAAGCGC GGAAACGCTGCGACAGCGGCTCTACACGCGTCGCGACGAGCTGGCCGAGGGCGAGTTACCGGTCCCGCTGAAGCTCGTGCACATCAACAAGTGCCCGGTC CTGGCGCCGCTCAAGGTCTTGCGCGAGGCGGATATCCAGCGTCTGGAGCTGGACTTGCCTGCGTGCCACGAACGTGCTGACGCGCTACGCGAACAGCGCC ACGTGTGGAGCCCAAAGCTGGACGAGGTGTACCGCGAAGAGGGGTTCATCGGTGTGGACGATCCGGAACAGCAACTCTATGACGGCTTTCTGGGCGAGCG CGATCGGCGGCTGTGCGATCGGATTCGCGAGATGGCGCCGGCAGAGCTCGCTCGGCAACAGTGCCACTTCGATGATGTACGGTTAGAGGAATTGCTGTTC CGTTATCGCGCGCGCAACTTTCCGGAAGCGTTATCGGCTGAAGAGCGGGTGAGGTGGCAACGGTTCTGCCAACAGCGCCTTAGCGGCGAGATAGCCGGCG CGCCCAATACCCTTGCGCAGTTCGAGGCGGATATACAACAGTTCATGCTCACTGCCACCCCGGCGCAGCAGCAGCTATTGCAGCAGTGGCGTGAATACGG GCGCGCCTTGGGTGAGCGTTACGGGTGCAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGTCCGGCCCGGTTGGCTATCGAAAAAGAGCAGCGGCTGTTACGGGTGGGAAGCGCGCAATAAAAAACGCCGCTTGTCGACGTCGATCAATAACGTCG GGAAGCGGCGTTCTTTATAACCCTGGTATTGCTTAGCCCAGAAGAGTGGCCCAGCTTTCCACGGTGTCGGAGCCCCATTGGGCTTTCCATTCTTTCAGCG TCTTGTGGTTGCCACCTTTGGTTTCAATCACTTCACCGCTGTGCGGGTTCTTGTACTGCTTGACGCGACGTGCGCGCTTGCTGGCGGCCGGCGCTTTCGC CGCACGTGGAGTTTTGCTGTTGCGGGAGGCATCCGGATCGAGCAGGGCGATGATGTCGCGCAGCGACTTCTGGTATTCGCCCATGAGTTCGCGCAGCTTG CCTTCGAACTCCAGTTCCTTTTTCAGTTTGTCATCTTCGGAAAGGGACTTCAGTCGCTCCTGAAGTTCCTTGATGGCCTCTTCAGTGGCGCGATACTCGT
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| Amino Acid Sequence |
>exonuclease I
MTPSIFWYDFETTGISPSRDRPLQVAGIRTNEALEEIGEPLNIYCRPGDDILPHPAACLVTGITPAVLQQKGMCEAQFVHHLHRELSTPGTCGAGYNSLR FDDEVTRYSLYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGIGWPEDDGRVTLKLERLSAANGLEHLNAHDALSDVRATIGLARLIRERQPRLYEY LFNLRRKHAVLEQVTLLEPLVHVSGRFSAARHFLSVVLPLAWHPRNRNALIVCDLQAEARPLWLESAETLRQRLYTRRDELAEGELPVPLKLVHINKCPV LAPLKVLREADIQRLELDLPACHERADALREQRHVWSPKLDEVYREEGFIGVDDPEQQLYDGFLGERDRRLCDRIREMAPAELARQQCHFDDVRLEELLF RYRARNFPEALSAEERVRWQRFCQQRLSGEIAGAPNTLAQFEADIQQFMLTATPAQQQLLQQWREYGRALGERYGCN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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