Pseudomonas stutzeri DSM 4166, PSTAA_0933 (pilY1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGCCACGTTGTTCATTGCGTTAATCATCCTTCTTGTCGTGACGCTGCTGGCCGTATCCAGCGTTCGCGAGGTCACTCTTGAGTCCCGAATGACCGGCAT CTTCATCGAGCAGCAGCGGCTGCTCAACGCAGCCGAGGCCGGTCTGCGAGAAGGCGAGGGTCGCCTCACTGGCCCTATCAAACCGTTGGAAGTTAGCTGT GCGTCCGATTATTGCTTGAGAGCCGACTCACCGGCATATGAACAAAAGTTCGATACCAGCATTGCCTACGCGCCCTCGGACGGCACCGCCAGCAATGGTG GAACCTCCGTCAGGTGGTATGCACTGCCCGCCCCATCGGGCAGCTCCGAGGGGGCCTCTGAGAACCCCGAATACGGCAACATGATGAAGGGCATGGGCGT ATTTCGGTATGAGGTCAATGCCGAAGCAACTAATAACAGTTCCGGACGCACTACAAATCTGCGCTCCACCACCGCCAAAGTGTTCAACTGAGAGCCTGAA
DNA Sequence for Gene
>PSTAA_0933 |pilY1
ATGGAAATCAAGACGCGCATTAACAATGCGAAGGCCGCTGCAAGCCTGCTGGCCTTCAGCCTGTTGTTTGGTGGCATGCACTCGGCGCAGGCCACCCTGC TGGACATCAGTCAGAAACCCCTGGTTCTTTCCGACAGCGTCGCGCCCAACCTAATCCTGACCCTGGACGAATCAGGCAGTATGCGCTGGGCATTCGTACC CGACGACATCAACGGCGTGCATGAAAGTCGCAGGGCCAAGTCGGCTGCGTTCAATCCTATGTACTATGATCCGGCTGTGACTTACCAGATGCCGATTAAG TACAATGCCGACGGCAGCGTGGCCTCTATCGGCTATAGCACTGCCTTCACGGAAGCATGGAACAACGGCTTCGTAGCGAACACTAGCACCGGCTCCCTCA ACCTTACGACGGGTTACAAGGTGAGCTGGAGCTACGATCCGACCGGTACCCTCGGAACTGCTTACGGCTATACCAGCACCAACAGCACCGCTAATAAGCT GGCCGCGAACCCCACCGCGGACTTCGCAGGTTCGGCGTCAATCAGCAACAACAACGGCAAGGCAACGGTGGTCAAGGGCGACATCACGTTCGTCATCACC CGCACAGGAACATCAACCTGTACCGCCACCGCGACCCTTTCGGGCGTTACGCTGAGCAACCCGACCTGCAGCGGCTCCAGCGGCACGTACACGGCGACTC TCGCCCAGGTAGCCGTACCCGCCTACTACTACGTGTACGACACGACGCAGTCCGGCTGCACCAAGGTCAAGACAGATGATAATTGCTATCGGCTTGTATT CGTCACCGCGACATCTGGCCAGCCGCGATCCGCCGACACCGAATCCGGGCTCGATGAGCGCAAGAACTTCTCCATCTGGTACTCGTTCTACCGCAACCGT GCACTGGCCACCCTCAGCGCCGCAAACCTGGCGTTTACCAGCCTGCCCAGCTCTATCCGCATGACCTGGCAAACGCTGAACAACTGTAAAACTTTTACCG GCAGCAGCGACTGCGGCACCAATTACTTCCGCAGGTTCACAGACCACCACCGCGGCAACTTCTTCAACTGGCTGCCCACTATAAACTTCAGCACCACCAC CTACTTGCTCCAGGCGACCGACCGTGCAGGTAAGTTCCTCGCGAGTGAAGAGCCTTGGTACTACGACCCGAACCCACTGAACAGCACCGGCGGCCGTGCA TCGTCGGTTACCTCGCCGGTCTACGCCTGCCGGCCCAGCTTCCACGTGCTAATGACCGACGGTATGTGGAACTCCGCCATGACCGTCGACACTGATGACA ACGCCGCGATCGCCAGCCTCCCAGACGGCACGGCATATTCGCCGCGCACACCCTTCAAGGACCCCACCAAGAACACTTTGGCAGACCTTGCGTTCAAATA TTGGTCGACTGACGCACGACCGAACCTGAAGAACGACCTCAAACCGCTTATCGCAGCGACCAATAGCGATGCTACCGCGCGCTATTGGGACCCTCGGAAC AACCCTGCCACCTGGCAGCACATGGTCAACTACACCGTTGGTCTCGGTCTGGGCAATGCACTTACTAACGCCAACGTCCCTTGGACAGGCGAAACCTACG CTGGCGCAGGCTATGAAGCGATAATGGCAGGCACCGCGAATTGGCCCGCCGCCTCCAGCGGTAGCGACAATAATGTCTATGACCTTTGGCACATGGCGAT CAACTCGCGAGGCGAGTTCTTTAATGCCGACAGCCCGGACAAGGTGGTGGACGCGTTCACTCAGATCCTAAATCGTATCGGCAACTACACCACTTCGGCG AGCCGGCCGGCGGTAACGGCCGCGCAAGTCGACGGTTCAAACTCCTACGAGGTGTATGAAACCGAGTTTTCTAGCGACGACTGGAGCGGCGACCTCAAGA AATACTCCCTCGACAGCAAAGGTGCCCGCAAACAAGCATGGAGCGCCAAAAGCAAGCTGAACGGCGAGCGCGCCGTCAAGATGGCCGCCGCCAGTGGCAA ACAATTCCAAGAATTCAACTGGACCAACCTCGATACCACGCAGAAGGCCTACTTCAATATCAATCCTGACAGCACCAGCAACGCCACCGACAGCAAGGGC GAAGCACGGGTTAACTACATCCGTGGCAACCGCAGCAACGAAGGCACGACCTCGGGAACGTTCCGCACCCGCAGTAGTGTACTCGGCGACATCGTCAACT CGGCCCCGGTCATCGTCAAGGACGCTCAGTACCTCGCCTACCTAGCCGACAAGATCGACGGCACGTCCGGGGACTACTACAAGTTCCAGCAGCAGGTGTC CGCGCGCAAGGAAATGATCTATGTGGGTGCCAACGACGGCATGCTGCACGGCTTCAATGCCTCCACAGGGGATGAAGAACTGGCGTTCGTTCCAAAAGCC GTGCTGCCCAATCTCTATCGCTTGACCGGCCAGAACTATCAATCCGGCGGGCACCGCTATTATGTCGACGGCACGCCCGTGGTCACCGACGTCTATTTCG GCAACGCTTGGCATACCGTGCTCATCGGCTCGCTTCGCGGCGGTGGCCGTGCCCTGTTCGCCCTAGACGTTACCGACCCGGATAACATCAAGCCACTGTG GGAATTCACCCATGACGACTTAGGCTATACCTTCCCGCAGCCCGTCGTGGCACGCCTGCACACCGGCAAATGGGCAGTCGTCACTGGCAATGGATATGGT AACCAGGGTGGCGCTACGGCAGACAAAGCCGCACTGTTCGTGATCGACGTCGAAACCGGCGCGCTGGTGAGGGAAGTCGTTGTTGAGGGCGACACCGCAA AGGCCAACGGGCTGTCCGCAGTACGGCTTGCCGACAACGACAGCGACGGCATTGCCGACTACGCCTACGCCGGCGACTTGCAAGGCAATCTCTGGCGCTT CGATTTGTTCAAAGCTACCAATACGACCACGCCCGCCTCGGGTAACCCCTTTGCATCCTCGGTGATCGGTACGGCAGTGGCGACGGACATCGTGGCATCC TATGGCGCCAAACCGCTGTTTAAGGCCGCTGATGCTGCCGGCGCGGTTCAGCCAATTACCGCCCCGCCCTCGCTGATACGCCACCCCTCGCAGAAGGGCT ATCTGGTGATCTTTGGTACGGGTAAATACTTCGAGGACAGCGACGGTAACGTCAACACCACCCTCGGCCATAGCGTCTACGCCATCTGGGACCGCAAGAC TAAGGCCGAAAATACAAGCACAAGCACGCCGCCCACCATTACTCGTTCCAATCTGCTCGAACAACAGATTCAGCAACAACTCACTACCAATATCAGCGGC GTGACCAACGAAAGCCGAACGATCACCCAGAACGCACCAAAATGGTACAAAGACAACGCAACGGCCGATTTGAACGATAGTGACGTGAATCACTGGGGAT GGCGCCTCGACCTGCAGATCGGAAGCACGAAGGCCGGCGAAATGATGATCAATCAGATGGTGGCACGCGGTCAGGCGCTCATTTTCAGCACTCTGACCCC CAACGACGACCCCTGCAAGGACGGTGTGGAGGCTTGGCTCTACGGCATCAACTCGTCTTCCGGCGGCCGGACCACATTCAGCGTGTTCGACATGGACGGC AACGGCGACGTGAATAGTGGTGACACTTACAACAACACAGTGATATCGAGCCGTAAATTGTCATCCTCAAGCGGCTTCAACCTTAGCGGCAATACGCTAT TCAGCACAGGCGAAAGCATTGTAGTGGACTACGGCCCTACCTCTAGCGGTCGTCAGAGCTGGCAGGTCATACCTAAGAGGAGCGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGTCCCTGCGCAAACCAAGCGGTTTTACTCTAATTGAGATGATGATCGTGGTCGCGATAATGGGGATTATGGCCGCGATCGCCATCCCCAGCTATCAAGA GTATGTCTTTCGCGGGAACCGTACGGAAGGCATAGCGCTGCTCAATGACGCGGCAGCACGACAGGAGCGTTATTACGCACAGAACAACAAATACGCCGTG TCCGTGAACGACCTAGGCATACAGGCGAGTTCGAAAAATGGTCTTTATGCCTTGAACGTCAGCACCGCCTCCGTTAACACCTACACTTTGGTCTCGGAAG CTAAAGGCGCCCAACTCAAGGATGTTAAATGCGGTAATTTAGCCTTGGACCAAGCGGGCAACAAATTCCAAAAATGGAACACTCAAGAAAAGAAAGGTAC TTCCGCAACGGGCGATTGCTGGAAATAAACTAGTTACACAAGGCCGGCAGCTAGCTCTTTGACAACTAATTACCTCGCCGAACCTACGAATGAACCTGAG
Amino Acid Sequence
>Putative type IV fimbrial biogenesis protein PilY1
MEIKTRINNAKAAASLLAFSLLFGGMHSAQATLLDISQKPLVLSDSVAPNLILTLDESGSMRWAFVPDDINGVHESRRAKSAAFNPMYYDPAVTYQMPIK YNADGSVASIGYSTAFTEAWNNGFVANTSTGSLNLTTGYKVSWSYDPTGTLGTAYGYTSTNSTANKLAANPTADFAGSASISNNNGKATVVKGDITFVIT RTGTSTCTATATLSGVTLSNPTCSGSSGTYTATLAQVAVPAYYYVYDTTQSGCTKVKTDDNCYRLVFVTATSGQPRSADTESGLDERKNFSIWYSFYRNR ALATLSAANLAFTSLPSSIRMTWQTLNNCKTFTGSSDCGTNYFRRFTDHHRGNFFNWLPTINFSTTTYLLQATDRAGKFLASEEPWYYDPNPLNSTGGRA SSVTSPVYACRPSFHVLMTDGMWNSAMTVDTDDNAAIASLPDGTAYSPRTPFKDPTKNTLADLAFKYWSTDARPNLKNDLKPLIAATNSDATARYWDPRN NPATWQHMVNYTVGLGLGNALTNANVPWTGETYAGAGYEAIMAGTANWPAASSGSDNNVYDLWHMAINSRGEFFNADSPDKVVDAFTQILNRIGNYTTSA SRPAVTAAQVDGSNSYEVYETEFSSDDWSGDLKKYSLDSKGARKQAWSAKSKLNGERAVKMAAASGKQFQEFNWTNLDTTQKAYFNINPDSTSNATDSKG EARVNYIRGNRSNEGTTSGTFRTRSSVLGDIVNSAPVIVKDAQYLAYLADKIDGTSGDYYKFQQQVSARKEMIYVGANDGMLHGFNASTGDEELAFVPKA VLPNLYRLTGQNYQSGGHRYYVDGTPVVTDVYFGNAWHTVLIGSLRGGGRALFALDVTDPDNIKPLWEFTHDDLGYTFPQPVVARLHTGKWAVVTGNGYG NQGGATADKAALFVIDVETGALVREVVVEGDTAKANGLSAVRLADNDSDGIADYAYAGDLQGNLWRFDLFKATNTTTPASGNPFASSVIGTAVATDIVAS YGAKPLFKAADAAGAVQPITAPPSLIRHPSQKGYLVIFGTGKYFEDSDGNVNTTLGHSVYAIWDRKTKAENTSTSTPPTITRSNLLEQQIQQQLTTNISG VTNESRTITQNAPKWYKDNATADLNDSDVNHWGWRLDLQIGSTKAGEMMINQMVARGQALIFSTLTPNDDPCKDGVEAWLYGINSSSGGRTTFSVFDMDG NGDVNSGDTYNNTVISSRKLSSSSGFNLSGNTLFSTGESIVVDYGPTSSGRQSWQVIPKRSE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site