Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCAGATCCAGCAGATCGAAGACCCGCGCACCCTGTACGAAAAGCCGTTGAACACCTTCGTCGCCAACTTTCTCGGCGAAAACAACCGCCTGCCGGCGCAC CTGCTGGAGCGGCGTGGCGAGAGCTGCACGGTCAAGCTCGGCCGCGGCGAAACCGTCGAGGCGCTGGCGGTCAATGTCGGTGCGACGGGGTCGCCGGTCA GCCTGTCGATCCGTCCGGAGCGGGTGCTGCTCAACGGTGCCAGTGCCAGCTGCCCGAACCGCTTCACCGGGCGCGTTGCCGAGTTCATCTACCTGGGCGA CCACATCCGCATCCGTCTCGAGGTCTGCGGCGTCAGCGATTTCTTCGTCAAGCAGCCGATCGCCGAGTTCGACCAAGCCCTGCGCGTGGGCGACGTGGTG CCGATCGGCTGGCACGTCGAGCACGTCCGGGCGCTCGACCCGCTGCAGGCGGCCTGAGGCATTACAAGAACCCTAAAACTGCATCATGGAGCGAACTGGT
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DNA Sequence for Gene |
>PSTAA_0676
ATGAGCAACTACCTGAAACTGTCCGCGCTGGCGCTCGGACTCGTCTGTGCCGGGCAAGCGGCTGCCGAGAACCTCACTGCGGTGAGCTTCGGCGGCGCCA ACAAGCAGGCCCAGGTGAAGGCCTTCTATCAGCCGTGGGAAGCCGCCGGTCACGGCCGCATCGTCGCCGGCGAATACAACGGCGAAATGGCCAAGGTCAA GGCGATGGTCGACACCAACAGTGTGTCGTGGAACTTGGTGGAGGTGGAGTCGCCTGAGCTGGCGCGCGGTTGTGACGAGGGGCTGTTCGAGGAGCTCGAT CCGGGCGTCGTCGGCAATCCGGACGATTTCGTCGAGGGTGCGATACAGCCCTGCGGCGTTGGCTTCTTCGTCTGGTCGACGGTACTCGCCTATAACGCCG ACAAGCTCAAGAACGCGCCGTCCGGCTGGGCGGATTTCTGGGATACCGAGAAATTCCCCGGCAAGCGCGGCCTGCGCAAGGGTGCCAAGTACACCCTGGA ATTTGCGCTGATGGCCGATGGTGTGCCGGCCAAGGGGGTCTATCAGGTGCTGGCCACCAAGGACGGCCAGAACCGCGCCTTCAGAAAGCTCGATCAGCTC AAGCCGCACATCCAGTGGTGGGAAGCCGGCGCGCAGCCGCCGCAGTTCCTCGCCTCCGGCGACGTGGTGATGAGCAGCGCCTACAACGGCCGCATCGCTG CCGTGCAGAACGAGAGCAACCTGCAGATCGTCTGGAGCGGCGGCATCTACGACTTCGATTCCTGGGCCATCCCCAAGGGCGCGAAGAGCCAGGAGCAGGC ACGCAAGTTCATCGCCTTCACCGTCGAGCCGCAGCAGCAGAAGGCCTATGCCGAGAACATCGCCTATGGCCCGGCGAACACCCAGGCCGTGTCGTTGCTG GATGAAAAGCGCCTGGCGCAGATGCCCACCGCACCGGAAAACATCGCCGATCAGGTGGCGATGAATGTGACCTTCTGGGCTGACTACGGCGAGCAGCTCG AACAGCGCTTCAACGCCTGGGCAGCACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGAGCGCTCCGCCGCATTGGCGGGGCCGGTCCCAGCTATCGGAACGAATCGCGGAGTCTTCATGGCCACAGCAATATCCCTGCCGGCGAACGAGATCG CCGAGCCCAATCTGAAACAGCGACTGGCACGGGCCGAACGGGTGAACAAGCTCAAGTCGCAGGCGCTGATCCTGCCGCTGCTGCTGTTCGTGCTGCTGAC CTTCCTGGTGCCCATCGCCTCGCTGCTCTGGCGCAGCGTCGAGAACCCCGAGGTGGTGAACACGCTGCCGCGCACGCTGGCGGCGCTGGCCGCATGGGAT GGTCGCGGACTGCCGGCCGAGCCCGCCTACCAGGCGTTGGCCGAGGACCTCTATCAGGCGCGCCGCGAGCAAACCCTGGGCGATCTGTCCAAGCGGCTGA ACATGGAGCTGGCCGGCTACCGCAGCCTGCTGACCAAGACCGCGCGGGCGCTGCCGTTCCGCGAGACGCCCGCGTCGTATCAGGAGGCACTGGAGTCGCT
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Amino Acid Sequence |
>polyamine ABC transporter periplasmic polyamine-binding protein
MSNYLKLSALALGLVCAGQAAAENLTAVSFGGANKQAQVKAFYQPWEAAGHGRIVAGEYNGEMAKVKAMVDTNSVSWNLVEVESPELARGCDEGLFEELD PGVVGNPDDFVEGAIQPCGVGFFVWSTVLAYNADKLKNAPSGWADFWDTEKFPGKRGLRKGAKYTLEFALMADGVPAKGVYQVLATKDGQNRAFRKLDQL KPHIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQNESNLQIVWSGGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQKAYAENIAYGPANTQAVSLL DEKRLAQMPTAPENIADQVAMNVTFWADYGEQLEQRFNAWAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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