Pseudomonas stutzeri DSM 4166, PSTAA_0329
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGCAGAACTACAACTCCATCAGCGTGCCGGTGAGCTACGCCTGGCGTAACGAAGACTGGTCCGTGCTGCTGGAAAGCAGCGTCGGCTGGTCGGTATCG CAGAGCGATGGCAGCCCTGACTATCCGCTGCGTTCGCTGTTGAGCACCGAGCAGAGAGCAGCTGCCGCAGCAAATGGTGAAAGCAAAGGCTCCACCAATC GCGGCATCAGCTATCGTCTGCAGGGCTTGTTCGAACGGCGCCTGAGCGATCATTTCGTCCTGGGCGGCGGCGTCAGCCTGCTGCACAGCGACGATTACGC ACCCAGCCGCGCGCTGCTCTACCTGCGCTACAACCTGATGCCCTGGCGTGGAAACCTACCTCTGCCGGTCGAGCCTCTGACGCCATACGCGGATTTCCGC TGACGAAGCGGTCGTCCTGACCGACCCAGTTCAAGCGGGCGCAGTTATACTTGCCCGCTTTTCTGGCCGGCCGGCCGTCATTCCGCCCGCAGGACACCAC
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| DNA Sequence for Gene |
>PSTAA_0329
ATGGACAGCATCAATTCCCGTATCGCCAACGAGCTGGGCGTACGCCCGCAACAGGTCGCCGCCGCCGTGGCGCTGCTCGACGAAGGCTCCACCGTCCCCT TCATCGCCCGCTATCGCAAGGAAGTCACCGGCAGCCTCGACGATACCCAGCTGCGTAACCTGGAAGAGCGCCTGCGCTACTTGCGCGAGCTGGACGAGCG ACGCGTCTCGATCCTCGCCAGCATCGAGGAACAGGGCAAGCTGACCCCCGAGCTCAAGCGCGAGATCGACCTCGCCGACACCAAGACCCGCCTCGAAGAC CTCTACCTGCCCTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGTCTCGGCGAGCTGGCCGATGCGTTGTTCGGCAATCCCGAGT TGAATCCTGAAAGCGAAGCCACCCGTTTTATCGACGCTGAGAAGGGCTTCGCCGATGTGAAGGCCGTGCTCGAAGGCGCCAAGTACATCCTCATGGAGCG CTTCGCCGAGGACGCCGACCTGCTGGCCAAGCTGCGGGACTTCCTCAAGCACAACGCCACCCTCAGTGCCCGCGTCGTACCAGGCAAGGAAACCGAAGGC GCCAAGTTCAGCGACTACTTCGAACACGACGAGGTGCTGAAGAACACCCCCTCGCACCGGGCATTGGCGATCTTCCGCGGACGCAACGAGGGCATCCTCA GCGTCAGCCTCAAGGTCGGCGATGAGACCCCGGGCAGCATGCACCCGGGCGAAGGCATGATCGGCGAGCGCTTCGGCATCGCCAACCGCGGCCGCGCCGC CGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACTTGGAAGGTCAAGCTCTACACCAGCCTGGAAACCGACCTGCTCGGCGAGCTGCGCGACAAGGCCGAG GACGAGGCCATCTCGGTGTTCGCCCGCAACCTGCACGACCTGCTGCTCGCCGCCCCGGCCGGCCCGCGCGCGACCCTGGCGCTGGACCCGGGCCTGCGCA CCGGCTGCAAGGTCGCAGTGGTCGACGCCACCGGCAAGCTGCTGGAAACCGCCACCGTCTACCCGCACGCCCCGCGCAACGACTGGGACGGCACCTTGGC AATCCTCGCCAAGCTGTGCGCCAAGCATGCCGTCGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCGGGCGAGCTGATC AAGAAGGTACCGGGTCTGAAGCTCACCAAGATCATGGTCAGCGAAGCCGGCGCCTCGGTGTATTCGGCCTCGGAGCTCGCCGCCCGCGAATTCCCGGATC TGGACGTCTCCCTGCGCGGTGCCGTCTCCATCGCCCGCCGCCTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGACCCGAAGTCCATCGGCGTCGGCCA GTACCAGCACGACGTGTCCCAGCTCAAGCTGGCGCGTTCGCTGGATGCCGTGGTCGAGGACTGCGTGAATGCCGTCGGCGTCGACGTCAACACCGCTTCC GCCGCGCTGCTGGCCCGCATCTCCGGCCTCAACGCGACGCTGGCGCAGAACATCGTGCAGTTCCGCGATGCCAATGGTGCGTTCAAGTCTCGTAGCGAGC TGAAAAAGGTCCCGCGCCTGGGCGAGAAGACCTTCGAACAGGCCGCCGGCTTTCTCCGCGTGATGAACGGCGACAACCCGCTGGACGCCTCCGCCGTACA CCCGGAAACCTATCCGCTGGTGCAACGCATCGCCCAGGACACCGGCCGCGACATCCGCTCGCTGATCGGCGACTCGGCCTTCCTCAAGCGCCTGGACCCC AAGCAGTTCACCGACGAGACCTTCGGCCTGCCGACCGTCACCGACATCCTCAGCGAACTGGACAAGCCGGGTCGCGACCCGCGCCCCGAGTTCAAGACCG CCGAATTCCAGGACGGCGTGGAGAAGCTCAGCGATCTGGAGCCGGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA CATCGGCGTGCACCAGGACGGCCTAGTACACATCAGCGCGCTCTCGGAGAAGTTCGTCAAGGATCCCTACGAGGTGGTCAAGGCCGGCGACATCGTCATG GTCAAGGTCATGGAAGTGGACATCCCGCGTCAGCGCGTCGGCCTGTCCATGCGCATGAGCGACACGCCCGGCGCCAAGACCGATGGGCCGCGGGGCGGCG GTGGCAAGCCACGCGGCAATGCGCCGCGTAGCGAGCGCCACGCCAGGGAGGACAAGCCGGCACCGGCCAACGCCGCCATGGCCGCGCTGTTCGCCAACGC CAAGCAGCTGAGGAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATGAGCATTCAAGTCGAGGCGGTGGGCAACTCCAGCGCCTTCGGCCGCCTGCTCGGCCTGGAGATTCACCAGGTCGGCAATGGCGAGGCCGTGCTCGG CCTGACCATGCACGACGGTCTGCGCAACCTGCACGGCAAGCTGCATGGCGGCGCGCTGTTTTCGCTGATCGACACCGCCATGGGCCAGGCCAGCCACAGC CTGGGCGATGGCTCGCCGAACAGCGTCACGCTGGAATGCAAGGTCAACTACATCCGCCCGGTGACCGATGGCGAGCTGCGTTGTCGCGCCTGGGTGGTGC ACGGTGGCCGGCGGACCCAGGTGCTCGAGGCCGAGGTCCATCAGGGCGACAAGCTGATCGCCAAGGCCCAGGCGACCTTCGCCTGCCTCTAACGGCCTGT GCCACCAGCCGCTCGCGGAGTCGGCACGCCTGGCCTGTGGTCGAAGCAACGCTGCCTCTTGTGAAGCGGCGTTTCCATCCCCATATTGGGGCGACTGTCG
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| Amino Acid Sequence |
>S1 RNA-binding domain-containing protein
MDSINSRIANELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRNLEERLRYLRELDERRVSILASIEEQGKLTPELKREIDLADTKTRLED LYLPYKQKRRTKGQIALEAGLGELADALFGNPELNPESEATRFIDAEKGFADVKAVLEGAKYILMERFAEDADLLAKLRDFLKHNATLSARVVPGKETEG AKFSDYFEHDEVLKNTPSHRALAIFRGRNEGILSVSLKVGDETPGSMHPGEGMIGERFGIANRGRAADKWLAEVVRWTWKVKLYTSLETDLLGELRDKAE DEAISVFARNLHDLLLAAPAGPRATLALDPGLRTGCKVAVVDATGKLLETATVYPHAPRNDWDGTLAILAKLCAKHAVDLIAIGNGTASRETDKLAGELI KKVPGLKLTKIMVSEAGASVYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGVDVNTAS AALLARISGLNATLAQNIVQFRDANGAFKSRSELKKVPRLGEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVQRIAQDTGRDIRSLIGDSAFLKRLDP KQFTDETFGLPTVTDILSELDKPGRDPRPEFKTAEFQDGVEKLSDLEPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVM VKVMEVDIPRQRVGLSMRMSDTPGAKTDGPRGGGGKPRGNAPRSERHAREDKPAPANAAMAALFANAKQLRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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