Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_4160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGGCTGTAGTCAACGTGCGGCCG ACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAAGACGACGACATGGCCGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGTCT GTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCG CTGATCGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCATGGCATGACCT ACGCGGCTATCGCCACCGAACTGGGTGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTGATGCTGGTAGCGGAGGACTG
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| DNA Sequence for Gene |
>PSTAB_4160
ATGGGCAGCGACTACCGCGTGTTGCAGCAGGCTGCCGAATGGTTCGCCCTGCTGCAGTCCGGCTCGGTCAGCGCCAGCGAGCGCCGCGCGTGGGCGGCAT GGCTGGAGCAGCCGGAACACGCCCAGGCGTGGGCGAAGGTCGAGCGCATCAGCGGCCAGTTCCAGCCGCTGACCAGTGATGCCATCGGCCGAGCCGCCGG GGCCATGCTGCAGCAACGGCAGTCGACCCGGCGGCAGGCGTTGAAGGTGCTCTCGGTGCTCTGCGGTGGCGCAGTCCTGACCGTCGCCGGCGGTGCGCTG CCCTGGCAGCGTTGGGCGGCCGATGAGCGCACCGCCGTCGGTGAGGTTCGTGATCTGCGCCTGGCCGATGGCACCCGGTTATGGCTGAACACCGACTCGG CGCTGGATATCCGCTTCGACGCGAAGGAACGAAGGCTGGCGCTGCAGCATGGCGAACTGCTGATCGACGCGCCCGCCAGCCGGCGCGGACGACCATTGGT GTTGAGCAGTCGCGAGGGGTATGTGCGCAGCGAGCAGGCCGCGCGCTTTTCGCTGCGCCAGGAGGAAGGGCGCACGCGTCTCAGCGTGTTCGCTGGCGTC GTGGACATTCAACTCGAGGGTTTCGGCGTGACCAGCGTGCCTGCCGGCCAGCAGGCTGCGTTCGACCGTCGCCATGTCGGGCCGCTGGCTGCTGCGCGCG CCGAGCACCAGGCTTGGGCGACCGGGGTGCTGCTGGCCGATAACCAGCGCCTGGAGGACTTCCTCGCCGAACTGTCGCGCTATCGCCATGGCTACCTCGG CTGCGATCCACGGATCGCCGATCTGCGTGTGGTCGGGGCGTTCCCGCTGGCCGATACCGACCGTGTACTGCAAGCCCTTGCCGCTACGTTGCCTGTGCGC ATCGAGCGGCGCATGGCCTGGTGGGTCAGCCTGGAACCGTTGCCCAAGCAGGCAGGCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAACGCTTACGCGAATAAAAAATATTCGCATCCGCAGTTCCCTTTCCGAATTCTCGCCGGGCATAGGACGAAACCCGTCATTCGAACAGGACTTCCCA TGCGCTCGACCGCCTTGCCCTTCCTTCCCGACCGTTCCCGTACCCTGGCGCTGGGTATCCGCGCCGCGCTGCTGTGCCTGCCCTTGAGCATCGCCCCCGG CCTGGCCCTCGCCCAGTCGACGACCCAGCAGGCGGTGCGCAGCTACGACATCCCTGCTGGCCCGCTGTCCAGCGCACTGAGCCGCTTCGCCGGCGAGGCT GGGGTGTTGCTGTCGGTGGACGGCAGCTTGCTGCAAGGCCTGGAAACGAACGGGCTGCGCGGCCAGTACGGCGTCGACGACGGTTTTGCCGAACTGCTGC AGGGCAGCGGCCTGCAAGCCGTGCGCGACGGCCAGGGCAACTACTCGCTGAGCCGCCGTACGGCACAGAGCGATGCCGTCGAGCTGCAATCGATGACCGT
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| Amino Acid Sequence |
>transmembrane sensor
MGSDYRVLQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQAWAKVERISGQFQPLTSDAIGRAAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGAL PWQRWAADERTAVGEVRDLRLADGTRLWLNTDSALDIRFDAKERRLALQHGELLIDAPASRRGRPLVLSSREGYVRSEQAARFSLRQEEGRTRLSVFAGV VDIQLEGFGVTSVPAGQQAAFDRRHVGPLAAARAEHQAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVR IERRMAWWVSLEPLPKQAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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