Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_51, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NQ34_RS30080
TCGCCCGCGACGATGCCGGCAGCCATGCCGCCAGCCTGGAAAATATCTCGGCGAATATAGAAAGCTCTGGAGATACCAGGATTTCTGCCAGCAATATCGT AAATAAGAAAGAATTTTTTGAGGTGTCATCTGAGCTTGTTTCCAGTGCAATCGGGATGCGGAGAACGTCGCCTGGTAACGGCCACATGGTCTTGCTGGAG AATTACGAGTCGAGTCTGAAAGCTGATGCTCCATCCGCAAGTATTTCTGCAGGAGGGAGTCTCTATGTGCTGGGCTCAGATTTTCTCAATTCGGCATCCT ATGTAACGGCTTCGAAAGACATCGATGTGCGTGTAGACAAATTTACCAATCAGGGCGCTACATTAGGAAAGTACTCGGTAAGGAGATCCTTCGAACACCC TTGGCTGCGCGAAGACAAAAGTATTCTGAGTTTTTGGCGCTCGGTAATGGAATATAATGCTTCGAATGATTCGCAATATCTTCCTTCCAGAAGAGGCGGG GCTCCAAATACCGTCAGTGGTGGATCCATACATTATTGGGATGAGAACTGGAATGAGTCGATTGCCTATACTGGTTGGAAAATGGGAGGGACGGCTAACC GAGAAACCCATGTGTTGATTGGTTGGCAAGATTACTGGACCTTTATTACACCTAGTAATTTTTATGGAATATTTCCTGAGGCGAAATATACAGAAGGTGT AAGGGTGCCACTTCCTGATGCAATAAGGAATGTCAATTACTTTGATGTTCTTACTGTTTCGGATGGTGCACAGAAAGGTGTGGCTGATGCCGTTGTGCAG GCGGCGGGAAAGGTCAGTATTACGGCTAGCCAAGAGATAAATAATAGCGTCGTTCGAGAAGGACTGCCGGTATCGTCCGAGCTAGGGATAGCCTTGAATA CACAAGTGTCGGCTAATACCTCATCTATTATTGTCAACTTGAACAGTCAACTGCCACCAGACTTGGCAAGGCAACAGATCAATCCTCTCACCCTACCGGG CTTCAGCCTGCCTCAAGGCCAGAATGGGCTCTTCCGCCTGGCGTCCCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCTGAAATCCGCCAGCGATCTC ACCCAGAGCGGCCATGGCGTATCTGTATCCGCACAGACAGGCAGTGGCGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTCGGCGATGATCGGGTCACCT CGCTTACCGGTTCCGCCTATCAGGGCCGGGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTT CCAGGCCGGTGAGCACCAGGCGACCACGGGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGCGTCATCCTCGCCGATCTGCGC GGTGGTCTACCCTCGTTCTCAAGCCTTCCCGCGGCTGATCGTATTCAAGGCACAGCGCCCGGTCACGATGGGAATGGAACTATTCTCGCCAATTGGCAGG GTGCGCAGGCGACGGTCCAGGCCTCGCCTTCGACAGTGCGTGTAGAGGGGGTAGTCTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGGTCTGCCGGC TGAGCAGTCGTCGGTGCAGGCACTGCCTTCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCGTTCTTGCCGAGCCTCCGGTT GGGCAGCCGGCGTTGCAAACCCTGCCGTCGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCA ACCCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGACGATAGCAAGAAGCGCCTGGGCGACGG TCTATACGAGCAGCGCCTGGTACGCGAAGCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTG ATGGACAACGCCATCGCCAGCAAGGACGTATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCCGCGCTGACCCACGACATCGTTTGGC TGGAAGAAGTCGAGGTGAATGGCGAGAAGGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGG GCGCGACGTGAACCTGATCACCGGCGGGGACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGC GGCCTGATCGAGGCCGGCAACCGCCTCGACCTGCTGGCCAGCGGCTCCATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCG CCCTTACCGGAGACGTCATCAATGAACGGACGGTGACCCAGCACCAGTCCTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCG TATCGAGGCTGCGCAGAAGCTGACCGTTTCGGCAGGACGCGATGTAGCCAATATTGGCGGTGTCATCGACAGCAAGGGCGACCTCGCCTTGCAAGGCGGC AGGGATGTCCTGGTTTCGGCTGCGGTAGCGGAGCGGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAGGTCGTGG CGGGGCGCGATATCAGCGTCAGCGCCGGACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGT GGGCCTGGTCGCGGCTGCCAACGAAGAGCATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGAC GCTGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGGCTGGTCGCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGC TGGAGCTGCTGGCCGCCAACGACAGCAGTTACTACCTCTACGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGA TGTGACGGCAGTGGGCAGCCAAATATCCAGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACTTACCAGGGCGCGAAGCTGGAATCGGGCAAC GACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGACGCGGTGAAGGACCTGCACCAGGAGAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGT CGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTACGCCAGAGCCAGCTCGTCGCCCAGGGCAACCTGGCGATCAAGGCCGTGGAAGGCCTGAAGATCGA CCTCAAGCACATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCCTGGCTGAAGCAGATGGAGCAGCGCGGC GATGTGGATTGGCGGCGCGTGCAGGAACTGCATGACAGCTGGAAGTACAGCAACTCCGGGCTGGGCGTCGGCGCGCAGTTGGCGATAGCGATCGTCGTGA CTTACTTCACGGCGGGCGCAGCCAGTGGGGCGATTGCAACGGCCGGGGCCGGAACCTCCATGGCAGGCGCGACCGCAGCCGCTACCGCTACGACTTCGGC GGGCTGGTTGAACGCGGCAGGTACCGCGGCGCTCAGCGGCGTGGCCAGCAATGGAGCGATCAGCACCATCAACAACCGGGGAAACCTGGGGGATGTCGTC AAGGACGTGACCTCCAGCGATGCGCTGAGGGGCTATGTAGTCGCTGGCACGACTGCGGGGCTGACTGCCGGCGTCTACGACAAATGGACCTCGACCCAGA CCGGCACCTCGACCGCTCTACCGAACACCGGGGCCGTGGCGCCCGCCGCAGGGTTGGGCACCTGGCAAGGCGTGGGCCAGTTCACCTCGAACCAGTTGCT GCAGAATGGTACTTCGGTGCTGTTGGACCGGGCGCTGGGCGGCAAGGGCAGCCTGGGCGATGCGTTGCAAAACAGCCTGGCAAATGCCTTTGCGGCCTAC GGCTTCAAGCTGATTGGCGACACCACCCATGGCGTACTGGACGACGGCAGCCTCGGCAAGATCGGCTTGCACGCCCTGATGGGAGGTCTGGCCGCCGAAG CGGTCGGTGGCGATTTCCGTACCGGAGCCCTGGCTGCGGGAGTCAACGAGGCGCTGGTGAATAGCCTCGCCAAGCAATACGCCAGCCTGCCCATCGATGA CAAGAAGGGCCTGCTGATCATGAGTTCGCAGTTGATCGGCGTGCTGGCGGCTTCGACGCAGGGCGATGCGGACGCCAAGAGCTTGCAGACGGGAGCCTGG GTGGCGGGGAATGCCACCCAACACAACTACCTCAGTCATTGGCAGGAGGAGAAGAAGCGGCAGGAGGTCGATGGCTGCAAGGACAAACCGCTCTGCAAAA CCGGAATAGAAGCCAAATGGGCAATTATTTCGGCCCAGCAGGATGTCGGTATCGTCGTAGGTGTTGGAGGAGGCATTGGTCTTTCGACAGCTGAAACCGC AGTGGGTGTTTATGAGCTGGTCAAGAACTGGAGGGAAACCTATGCAGCTCTGGAGCAGTTGGCCACTTCGCCAGAGTTCCGGCAGCAGTTTGGCGATAAC TACCTGAAGGGGCTGGAGGAGCGCGCCGCATTCTTGACCCAGGCATACGAGGATGCCGGCTGGCAAGGTTCGGTCACAGCTGGTGTCGAGGGCGGTAGGT TCGCTGCGGAACTTGTTGGCGTTCTGACGGCAGTGAAAGGTGGCGCGCAGATAACCGCCAAGCTGCCAACAGCAGCCAAGAACCTGGTCAACGCGATTGC GGAGTCACCTGTTTCCGGTAGTATGAGTTCGCAGCTCGGGGCAGTGGGGGACTTGGGTAGGCTGGGTGGGGGTGCAAAAGCGACTGCGACGGTGATCGAT ACCGCTCCGATGGCCCAGCGGGTCATGGATGTTCGAGCTGGATTGCCGTCTAATTTAAGGCGCAGTGGTAATGTAGCTATCGCAGAAATAGATATTCCCG GAATACCTAGGCAGATGGCTGCGCACAGCCAAGTCTCTGATGCCGGTAAAGGGCTTATTGGCTCTGGAAGTGGAAATTTTGTGGCTCAATCTGTACCCAA CAAGGCCGGAGATATGGTTTATCGGGGAATAGATACGGAATACAAAATACTAGACAATATTGCTGATCAATTAGGAAGCAACACCTCCGCAAGAGGGACT GTAAATATTCTAACGGAGAAAGCAGCTTGCGCAAGTTGTCTGAACGTGGCTGAGCAGTTTAAGGCGAAGTATCCCAATATCACAGTTAATATTCTTGATA ATCAGGGCGTTATGCTCCGTCCGCCGAGGAAGACGCCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGAAGAACGTGTGACTTATGGAGAAATCCGGGCTTGGTTTCTGGGCAGCTATTACAACTATTGCAGGGTCAAACTCAACCACCAAAGCCCATGGGTTGA GGGAGAAAGTGAAGTAGGCTATGCCTACAGTGAGCTTGAAAACTCCTTTGATTTGCCTATTGAGAAATTAATGTTGGAAGTTTTAGCGCTTATTCTCTCG GCGGGCAGGTCTTCGGATAAAGTTAAGGGATATCATCTTGATATTATTCATGGATTGCTAAAGGAGATCAAGCTGTCTTCTGTTCTGGATGATTTGCCTT CTGATGAGGCAGCAGAGCTAAGAGACGATCTCAGAGTGTTAGGTCTTTATTAATTAGCCCAGGGCGGGTTATTTACTTGGTGCAAAAGGAACTGCTAATT TCCCGGAAGGGATGAGCTTCAATCCCAACATCAAGAATCACCTCAGCAATTTTGATGGCCTGACGCAGAAGAGTGGGATTATAGCATAAAGGGGACAGAT
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Amino Acid Sequence |
>hypothetical protein
ARDDAGSHAASLENISANIESSGDTRISASNIVNKKEFFEVSSELVSSAIGMRRTSPGNGHMVLLENYESSLKADAPSASISAGGSLYVLGSDFLNSASY VTASKDIDVRVDKFTNQGATLGKYSVRRSFEHPWLREDKSILSFWRSVMEYNASNDSQYLPSRRGGAPNTVSGGSIHYWDENWNESIAYTGWKMGGTANR ETHVLIGWQDYWTFITPSNFYGIFPEAKYTEGVRVPLPDAIRNVNYFDVLTVSDGAQKGVADAVVQAAGKVSITASQEINNSVVREGLPVSSELGIALNT QVSANTSSIIVNLNSQLPPDLARQQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSGHGVSVSAQTGSGASGWSTQARRVGDDRVTS LTGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRGGLPSFSSLPAADRIQGTAPGHDGNGTILANWQG AQATVQASPSTVRVEGVVSSPGGNGSILAGLPAEQSSVQALPSAVRAQGSLPRLEERSAVLAEPPVGQPALQTLPSVARVEGVPSNATPSNSHKYLIETN PALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIASKDVLGLTPGVTLSAAQVAALTHDIVWL EEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRLDLLASGSIRNDQGGIIAGREVSLSA LTGDVINERTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVANIGGVIDSKGDLALQGGRDVLVSAAVAERGWTAGSQAYQTQTTQMGAEVVA GRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGDLAINAGQDLRLVASQASAGDEAYLVAGDKL ELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFDAVKDLHQESHEKSKGDLAWQS SKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKQMEQRGDVDWRRVQELHDSWKYSNSGLGVGAQLAIAIVVT YFTAGAASGAIATAGAGTSMAGATAAATATTSAGWLNAAGTAALSGVASNGAISTINNRGNLGDVVKDVTSSDALRGYVVAGTTAGLTAGVYDKWTSTQT GTSTALPNTGAVAPAAGLGTWQGVGQFTSNQLLQNGTSVLLDRALGGKGSLGDALQNSLANAFAAYGFKLIGDTTHGVLDDGSLGKIGLHALMGGLAAEA VGGDFRTGALAAGVNEALVNSLAKQYASLPIDDKKGLLIMSSQLIGVLAASTQGDADAKSLQTGAWVAGNATQHNYLSHWQEEKKRQEVDGCKDKPLCKT GIEAKWAIISAQQDVGIVVGVGGGIGLSTAETAVGVYELVKNWRETYAALEQLATSPEFRQQFGDNYLKGLEERAAFLTQAYEDAGWQGSVTAGVEGGRF AAELVGVLTAVKGGAQITAKLPTAAKNLVNAIAESPVSGSMSSQLGAVGDLGRLGGGAKATATVIDTAPMAQRVMDVRAGLPSNLRRSGNVAIAEIDIPG IPRQMAAHSQVSDAGKGLIGSGSGNFVAQSVPNKAGDMVYRGIDTEYKILDNIADQLGSNTSARGTVNILTEKAACASCLNVAEQFKAKYPNITVNILDN QGVMLRPPRKTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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