Pseudomonas aeruginosa AZPAE13757, NQ34_RS27765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTTTTCGCGCAGTTCTTTCTGCGCGGCGCGGAATTCGGCGTTGTACTGCCAGGAGCGTTCGCTGCCGTCCTGGGCCTGGGTAGTGGCGGCGCCGGTC GCCAGCAGGGCGGCCAGCAGCATCGGGATGATCTTCATGGCAAACCTCTCGGGTTGGCTCGTCGCCGGGGCGAGGTATTCGTCCCGTTTGAGCAAAGAGT AAGAGCGGACGGATTACCCGAGGGTGAGTGGAAAATTACGTTTCCGATAACTTCGGCGATGCTCCGTTGCATGGCGGAGGAGTCTGCGCGAAGCGCATTA AGTGCGAGTTAAGATTGCGGAAAAGTAATCCCCGCCTCATGTCTGCGTCATTTCCCCGGTTCCAGAATCAGCCCCACGGTCAATGCCGGTTGCGGCAGGA CTGCGCGGGGGCGCGATCGACCAGAAGTTCACGCACAGCCAGCGCCGCAAGGCATGGCCGCAGAAGAAAAACAGACATGAACCGATCTGGAGCAATCGCC
DNA Sequence for Gene
>NQ34_RS27765
ATGCAAGGGGATGGAAAGAAACGACTGTGGACGCTTCCACTGCTGCTGGGCGCCGGACTGATGGCCTCGGCCGTCGCCGAGGAGAACGCCGAGCGGAGCA AGGAAGGTTTCATCGAGGGCAGCGAGGTCAACCTGCTGCTGCGCAACTTCTACTTCAACCGCGACTTCCGCAAGGGCCAATCGAGCCCGGCGGGCGGCGG CTACACCGAGGAGTGGGTGCAGGGCTTCATGGCCAACTTTTCCTCGGGCTTCACCCAGGGCACGCTGGGCGTCGGCATCGACGCCTTCGCCCAGCTCGGC GTGCGCCTGGACAGCGGCGGCGGGCGTTCCGGCGCCGGCGGTAGCGTCGACCTGCTGCCCTATGACGACCAGGGGCGGCCGCAGGACGACTATTCGCGAG CCGGCGGCGCGGTCAAGCTGCGCTGGTATGGCACCGTGCTGCGGGTCGGCGACGTGTTCCCGGAAACCCCGGTGATCCAGTACGGCAACAGCCGGCTGTT CCCCTCCAGCTTCCGTGGCTTCACCCTGGTCAACGACAGCCTGGCGAAGGGCCTGACCCTGCAGGCCGGCAAGCTGAACTCGATGACCCAACCGAACAGC ACCAGCGGCAGCGACGACTTCTACAGCTTCTACACCGGCCGGCGCATCGACTCGCCGTGGGTCGCCTACGCCGGCGGCGACTACCAGGCCACCGAGCACT GGAGCGTCAGCCTCTACGGCAGCCGCCAGAAGGACGCCTGGGACCAGTACTACGCCGGCACCAGCTTCAACTATCCGCTGGACGACAAGCTGTCCCTGCT CGGCGGCGCCAACTACTACAAGGTCAAGGACCAGGGCAGGCAGGTGATGGGCGAACTCGACAACGACATCTGGAGCGTGCGCGGCGGCTTCGCCTACGGT CCGCACCAGGTGCTGCTGTCGTACCAGCGCAACAACGGCGACGACGACTTCGACTACCTGCGCCAGACCGACTCCATCTACCTGGACAACTCGATCCAGT ACAGCGACTTCAACTCGCCCAAGGAACGCTCGCTGATGCTCCGCTACGACCTCGACATGGCCGCCTTCGGCGTGCCGGGGCTGAGCTTCATGACCCGCTA TGGCAAGGGCTGGGACGCCGATTATTCGAATGCCAACAGCGTCTACATGCGCACCGACGCCAACGGCAACCCGCTGACCAACCAGGGCCGCTGGGAACGC GACGTGGAGGTCAAGTACGTGGTGCAGGGTGGCGCGGCCAAGGACCTGGCGTTCCGCGTGCGCCAGGCCACCGTGCGCTCCGACAGCTTCGAGTCGGACC TCGACGAAGTCCGCCTGATCGTCGAATACCCGCTGCAAGTCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCGCGCCGCCGCCCCGTCCGGGGCGGCGCTCTGCGACAGCCCGTTGCTGGCGGCTGCGCGGCGGCGCTGCTACTTTCCTCTGGGTAGGCGGGCCGAAG GGCGGTTCCTGGCCGGGCATGGCTTCGACCTGCCGGTGGGCGCCGCGACCCGAACCTCGGCCACGCCATTCCACCCATGCCGCCCGGGCACCGGCGTGCC CGTGGCAGCCCAGGCTACGGGCGCCGCGTAGCCAGCCAAGCGGGAGTCGACATGGCCTCGTGGACCTTGGTGGACGCCAGTGCGATCGCTGTCCGCCATC CCTACACCTTCTACAAACCGGACGCGGAGACCATCGACCGGGTCGCCGCCGGGGAAAGCGTCAAGCTGATCTTCGCCTTCGATACCGACAACCCCGATGC GCCGCGCGCCGAGCGGCTCTGGGTGACGGTCGAGGGCATCGAGGCGGATGGCGCCTTCAGCGGCCGCCTGGACAACTATCCGCAATACATCCGCGACCTG
Amino Acid Sequence
>porin
MQGDGKKRLWTLPLLLGAGLMASAVAEENAERSKEGFIEGSEVNLLLRNFYFNRDFRKGQSSPAGGGYTEEWVQGFMANFSSGFTQGTLGVGIDAFAQLG VRLDSGGGRSGAGGSVDLLPYDDQGRPQDDYSRAGGAVKLRWYGTVLRVGDVFPETPVIQYGNSRLFPSSFRGFTLVNDSLAKGLTLQAGKLNSMTQPNS TSGSDDFYSFYTGRRIDSPWVAYAGGDYQATEHWSVSLYGSRQKDAWDQYYAGTSFNYPLDDKLSLLGGANYYKVKDQGRQVMGELDNDIWSVRGGFAYG PHQVLLSYQRNNGDDDFDYLRQTDSIYLDNSIQYSDFNSPKERSLMLRYDLDMAAFGVPGLSFMTRYGKGWDADYSNANSVYMRTDANGNPLTNQGRWER DVEVKYVVQGGAAKDLAFRVRQATVRSDSFESDLDEVRLIVEYPLQVL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site