Pseudomonas aeruginosa AZPAE13757, NQ34_RS25820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_24, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCGGTGAGCGCCGGCACCGGTGCGGGCGCCGCCGAGGAAGTGCTGGGCGCCGGCCAGCAGGTCGGCTTCGCCGACGGCAAGCTGGGCCGGCCCGTGGC CATCGACGCCGCCGCCGCGCTGGCCTGGCGCCAGGGTTGGCTGAGCTTCTACCGGCGGCCGCTGGCGGAAGTGCTCGACGAACTCGCTCGCTACTACCCC GGACGCATTCTCCTGCTCGACGACGCGCTCGGTCGCCAGCCGGTCAGCGGCAGCTTCCGCAGCGATGATCCCGAAGCCGCGCTGAAGTCGCTGCAGGCGG TGCTCGGCTATCGCCAGCAGATCCTGTTCGGACGCCTGGTGGTGATTCGCTGACGGTGGCCCCGGTCCGTTTGGCCGCAGGAATCTTTCCCGGCGAAGAA TTTTTTTGCCCTGCGGGGTGAGGTAAATCCGGCGCCGCTTCGTGTAGTGCTCATGACCGCGATTGATTCGCATTAGAAAAGCGACCGACACGAGCAACCC
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| DNA Sequence for Gene |
>NQ34_RS25820
ATGACCCCGTTCCCGCGCTTCGCCCTGCGTACTCTCCCCGCCCTGTTCCTCAGCCTCGGCTGTCTCGCCGCCACCGTGCAGGCCGCCGAGGCGGTTCGCT ACCGCTTCAGCCAGGCTGCCGCGCCGCTGGCCCAGGCGCTCAACGCGTTCAGCCGGGCCAGCGGGCAGACGCTGCTCTACACCGCCGAGCTGCCGCCGCA GGCGACCGCTCCGGCATTGCACGGTTCGCTGGTCGCGGAGGAGGCGCTGCAACGCCTGCTGCAGGGCAGCGGCCTGCGCGCGCGGCGGATCGACGAGCGC ACCCTGACCCTGGAACCGATCCCCGCCAGCGGCGCGCTCGACCTCGATGCCACGACGGTCTCCGCCGCCGCCCCGGCGCAGGGCTACCGGCCGGCGGCCA ACGCCTCGATCAGCCGCGGCGATGCGCCGCTACTGGAAATCCCCCAGGCGATCAGCGTGGTCCCGGCACAGGCGCTGCAGGACCAGCGCCCGCGCAACCT TGACGACGCGCTGGGCAACATCAGCGGCATCACCCAGGCCAACACCCTCGGCGGTACCCAGGACGCGGTGATGAAGCGCGGCTTCGGCGACAACCGCGAC GGCTCGATCATGCGCGACGGCATGCCCTCGGTGCAGGGCCGCAATTTCACCGCCACCGCCGACCACGTCGAGGTGCTGAAGGGGCCAGCATCCCTGCTCT ATGGCATCCAGGATCCGGGCGGGGTGGTCAACGTGGTGAGCAAGAAGCCACAACTGCAACAAGCCAACGCCCTGACCCTGCGTGGCTCGGCCTACGCCCA CGGGCGCAACGGCAGCGGCGGCCAGCTCGACTCCACCGGCCCGCTGGGCGACAGCGGACTGGCCTACCGGATGATCCTCGATCATGAGGACGAGGATTAC TGGCGCGACTTCGGCAAGAGTCGCGAGACGCTGGTGGCGCCCTCGCTGGCCTGGTACGGCGAGGACACGACGGTCAACCTGAGCTACGAGCACCGCGAGT TCACCACGCCGTTCGACCGTGGCACGGCCATCGACCCGCGTACCAACCGCCCGCTGGACATCCCGCGCAGCCGGCGCCTGGACGAGCCCTTCAACATCAC CGAGAGCCGTTCCGAGCTGACCCGCCTGGATCTCGAACGGCAGCTCGACGACACCTGGAAGGCCCACTTCGGCTACGGCTACAGTCGCGAGACCTACGAC GACAACCAGGCCCGGGTGATGGCCGTGAATGCCGACGGCACCCTGACCCGGCGCATGGACGGCACCCACGGCGCGGTCAGCAGCGACAGCTTCGCCACCC TCGGCCTGAGCGGAACGCTGCAACTGGCCGGGATGCAACATGACCTGCAATTCGGCATGGACCACGAGAAGCGCAAGATCTTCCGCGCCGACCTGCTGCG CGACAGCAAGACCAGCCGCTTCGACTACCTCGACCCGGTCTATGGCCAGGTGGTGCCGTCGACCCGGGTGGTCGCCGGCGACAGCGACCAGACCGACAAG CTGCGCAGCGACTCGCTGTACTTCCAGGACTCGATCCACCTGGACGAACGCTGGATCCTGGTCGGCGGCGCGCGCTACCAGATCTACGACCAGCTCGCCG GGCGCGGCCGGCCGTTCAACGCCAACACCGATATCAACGGGCAGAAATGGGTGCCGCGCGGCGGCCTGGTCTACCGCCTGAGCGACGAGGTTTCGCTGTA CGGCAGCTACACGCGCTCGTTCAAGCCGAACTCGACCATCGCCCCGCTGAGCACCGGCGAGACCATCGATTCGGCGATCCTGCCGGAGGAGGCGACCTCC TGGGAGCTGGGCGCCAAGCTGGATGTGCCGGGGCGTCTCAGCGGCACCCTGGCGCTGTTCGACATTCGCAAGAAGAACGTGCTGGTCAACGAACTCGACG GTGCTGGCAACAGCAGCGTGCGCGCCGCCGGCCGGGTCCGCTCGCGCGGCCTGGAGCTGGACCTCACCGGCCAGCTCAGCGAACGCTGGAGCCTGATCGG CAGCTACGCCTGGCTCGCCGCGGAAGTCACCGAGGACCCGACCCTGGAGGGCAAGCGCCTGCAGAACGTGGCGCGCAACACCGCGTCGCTGTCGGCGGTC TACGAACTCGGCCAGCTCTTCGGCGGCGACCGCCTGCGCCTGGGCGGCGGCGCGCGCTACGTCGGCAAGCGCCCGGGCGACCCGGCCAATTCCTTCGACC TGCCGTCCTACACCGTGGCCGATGCCTTCGCCAGCTACGACACCCGCTTCGGCGGGCACGGCGTGAAGTTCCAGCTCAACGTGAAGAACCTGTTCGACCG CACCTACTACCCGTCCAGTGCCAATCGACTGTACGTGGCGATGGGCGAGCCCCGGCAGTTCCAGGTGTCGACGACGGTGGAGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGGCGCTCGCTCCAGGTGGGGTTCCCCGGCGTCCTCCTGGACGTGGAGGCCCCCTGAAGGGCGAAGGGTCGGCGCGATGCTGCCCGACCATGCTCCAT CCGGTTCCTTCTTCCCCCAGGGAAGGGATTGCCCGGCGCGTGAGTCGTTCCGCCATCCAGTGCCTTCTCCCTTTGGGGAAAGGAAGGCGGAGAACCGCCT GGCACGACCTCGCCGCACGCCACACCTCGTACCCAACCCGCCCGTTGGGTACCATGCCCGCACCACTCGCCGCCCCGGCCGCCCCATGAACCTCGACAAC CGCATCAAGTTCCGCCACCTCGCCTGCTTCCTCGAAGTCGCCCGCCAGCGCAGCTTCGCCAAGGCGGCGGATGCCGTGGCGGTGTCGCAGCCGGCGATCT CCAAGACCCTCAAGGAACTGGAGGAAATCCTCGGCGCGCGCCTGTTCGAACGGAGCAAGGCCGGCGCCGAGCTGACCGAGGCGGGCGTGACCTTCCTGCG
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| Amino Acid Sequence |
>TonB-dependent receptor
MTPFPRFALRTLPALFLSLGCLAATVQAAEAVRYRFSQAAAPLAQALNAFSRASGQTLLYTAELPPQATAPALHGSLVAEEALQRLLQGSGLRARRIDER TLTLEPIPASGALDLDATTVSAAAPAQGYRPAANASISRGDAPLLEIPQAISVVPAQALQDQRPRNLDDALGNISGITQANTLGGTQDAVMKRGFGDNRD GSIMRDGMPSVQGRNFTATADHVEVLKGPASLLYGIQDPGGVVNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDY WRDFGKSRETLVAPSLAWYGEDTTVNLSYEHREFTTPFDRGTAIDPRTNRPLDIPRSRRLDEPFNITESRSELTRLDLERQLDDTWKAHFGYGYSRETYD DNQARVMAVNADGTLTRRMDGTHGAVSSDSFATLGLSGTLQLAGMQHDLQFGMDHEKRKIFRADLLRDSKTSRFDYLDPVYGQVVPSTRVVAGDSDQTDK LRSDSLYFQDSIHLDERWILVGGARYQIYDQLAGRGRPFNANTDINGQKWVPRGGLVYRLSDEVSLYGSYTRSFKPNSTIAPLSTGETIDSAILPEEATS WELGAKLDVPGRLSGTLALFDIRKKNVLVNELDGAGNSSVRAAGRVRSRGLELDLTGQLSERWSLIGSYAWLAAEVTEDPTLEGKRLQNVARNTASLSAV YELGQLFGGDRLRLGGGARYVGKRPGDPANSFDLPSYTVADAFASYDTRFGGHGVKFQLNVKNLFDRTYYPSSANRLYVAMGEPRQFQVSTTVEF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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