Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCACCGGCAGCCCGGACGCGGTACGCCTGGAACATCGCGTCGCCGGCGCCGACGCCAACCCCTACCTGCTGCTGGCCTCGGTGCTTGCCGGGGTGCACCA CGGGCTGACCAACAAGGTCGAGCCGGGCGCGCCGATCGAAGGCAACTCCTACGAGCAGTTGGAGCCGAGCCTGCCGAACAACCTGCGCGACGCCCTGCGC GAACTGGACGACAGCGAGATCCTGGCGAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCCTGCAAGGAAAGCGAGCTGGAGGAGTTCGAGTACT CGATCTCCGACCTCGAGTACAACTGGTACCTGCACACCGTGTGAGCATGGGCGGGCGGCTCCGGTCCGGCGCCGCCCGCCCGTTCTTCCGTCGAGGTTCC CACCCTTGCTGAAGGTAGACGGCGGCAAGCCTGCGGTTTCCGCCCGTCCGCCTTCCTTTGCTGTGCATTAGAAAAAGAAGAAATCGAGGCAAGCATACCC
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DNA Sequence for Gene |
>NQ34_RS24155
ATGTCGAATCCTCCCCCCACCGCAGAACGAACCCAGCTTCGCAAGTCCCTCAAGCTGTGGCAGATCGTCATGATCGGGTTGGCCTACCTGACCCCGATGA CCGTCTTCGACACCTTCGGCATCGTATCCGGGATTTCCCAGGGACACGTGCCCACCGCCTACCTGCTGGCCCTCGCCGGCGTGCTGTTCACCGCGATCAG CTACGGCAAGCTGGTCCGCCAGTTCCCCACCGCAGGCTCGGCCTATACCTACGCGCAACGAGCGATCAATCCCCATGTCGGCTTCATGGTCGGCTGGTCG TCGCTGCTGGACTACCTGTTCCTGCCGATGATCAACGCACTGCTGGCGAAGATCTACCTGACCGCATTGTTCCCCGAGGTCGCCCCGTGGATCTGGGTGG TGATGTTCGTGCTGATCATGACCCTCATCAACATCAAGAGCGTGAACCTGGTCGCCAATTTCAACACCGTCTTCGTGCTGGTCCAGCTGGCGATCATCGT GGTCTTCATCGGCCTGGTGATTCACGGCCTGAACAACGGGGAGGGGACCGCCACGGTGCTCAGTACCCAGCCGTTCTTCTCCGAGCACGCGCATCTCTCG GCGATGGTGGCGGGGGCGACGATCCTCTGCTTTTCCTTCCTCGGTTTCGACGCGGTGACTACGCTGTCCGAGGAAACCCGCGACGCCGGCAGGGTGATCC CGCGGGCGATCTTCCTCACCGCGCTGTACGGCGGGGTGATCTTCATCACCGTGTCGTATTTCCTGCAGTCCTATTTCCCGACCAACGTACGCTTCAAGGA ACCCGACGCGGCGCTGCCGGAAATCGCCCTGTACGTCGGCGGCAAGCTGTTCCAGTCGATCTTCCTCTGCGCCACCTTCATCAATACCCTGGCGTCGGGC CTGGCCTCCCAGGCCAGCGTGTCGCGCCTGCTGTACGTGATGGGGCGGGACAACGTGCTGCCGGAGCGGATCTTCGGCTTCGTCCATCCGAAATGGCGTA CGCCGTCGATCAACGTGCTCATCGTGGGCATGGTGGCGCTCTCGGCGATCTCCTTCGACCTGGTGACGGCGACCGCGCTGATCAATTTCGGCGCCCTGGT GGCCTTCACCTTCGTCAATCTCTCGGTGATCGTGCATTTCTATGTGCGCGGCGGGCGCAACCGCAGCCTCAAGGAGCATTTCCACTACCTGGTCCTGCCA TTGCTCGGCGCGGCCATCGTCGCGGTGCTCTGGCTCAACCTGGAAAGCACCTCGCTGGTGATGGGGCTGATCTGGGCCGGACTGGGCTTCGGCTACCTGT TCTACCTGACTCGCAGCTTCAGCCGTCCGCCGCCGCGCTTCCAGGAGAGCGAGCTGAGCCCGACCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGAGCGGTGAATGGATTCAGCGGAAATGTGAAGGAAAAAGATTGGTAATCTTCACGAAATTTTCACGGTGACGGGTCAATCATGGACCCATGGCTAAC GGACTAGCCCCCCATCTGAAGCCCGCCTCATGGCGGGCTTTGGCTATCTGCAGACAGCGAATTTCGCGTTTTCCCTCCTTTTCACAGGGGTTTCCGGCCT CCCGGCTGGCAATGCGCCTGCGACGACATGTCCGAATCCAGACAGAATTGGACGCCCCCAAAAAGCGCAGACACGGCTAGAATCCACGCCGTCCCGATCC GGTTCGATGGCCGTGGCGGGGGAGCCCGGTATCCGCTGGTCGGTGTTTCCTGTGGTGCTGTGCGTCCTTCCCTAGACTACCCGGCTCGCTCGAACCATCC CTTCGCGGGGGCGGAACGGCACAGGGTCGTTCGGCATGGAAGCTGCCTGGGCCGGCCTTCGACACACCTATAAGAGTAGAAATCTGCATGACATACCCTG
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Amino Acid Sequence |
>putative amino acid permease
MSNPPPTAERTQLRKSLKLWQIVMIGLAYLTPMTVFDTFGIVSGISQGHVPTAYLLALAGVLFTAISYGKLVRQFPTAGSAYTYAQRAINPHVGFMVGWS SLLDYLFLPMINALLAKIYLTALFPEVAPWIWVVMFVLIMTLINIKSVNLVANFNTVFVLVQLAIIVVFIGLVIHGLNNGEGTATVLSTQPFFSEHAHLS AMVAGATILCFSFLGFDAVTTLSEETRDAGRVIPRAIFLTALYGGVIFITVSYFLQSYFPTNVRFKEPDAALPEIALYVGGKLFQSIFLCATFINTLASG LASQASVSRLLYVMGRDNVLPERIFGFVHPKWRTPSINVLIVGMVALSAISFDLVTATALINFGALVAFTFVNLSVIVHFYVRGGRNRSLKEHFHYLVLP LLGAAIVAVLWLNLESTSLVMGLIWAGLGFGYLFYLTRSFSRPPPRFQESELSPTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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