Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATGACCGCCTTCACCTGCGACTACCTGCGCATCATGTCTTCCGGCAACATGGCGCCCCATGAGCTGGAAGGCCTGTTCGACATGGAGCTGACCAGCCTGA AGGAGGAACTCGATCATCCGGCCCACGCGGTCAGCAAGGTGGCCGACGGCCTGCCGGCGATGGGTATCGTCGCGGCGGTGCTGGGTATCGTGATCACCAT GTCCATCCTCGCTGAGGCGGACAACGCGATGATCGGCTACAAGGTGGGGTCGGCGCTGGTGGGTACCTTCCTCGGTATTCTCGCCTCCTACGGCTTCTTC GGCCCGCTGGCGGCGGCGCTGGAGCACGATGCCAAGGAGGAGCTGAACGTATATGAGGCGATCAAGGCGACTCTGGTGGCCTCGGCGTCCGGCATGCCGC CGAGCCTGGCCGTCGAGTTCGGCCGTAAGGTTCTCTATCCGGCGCACCGCCCGAGCTTCTCCGAGCTCGAGCAAGCCATGCGTGGCAGCTAAGGTTCGCC
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DNA Sequence for Gene |
>PSTAB_3752
|motB
ATGGACAATACCCAACCGATCATCGTCAAGCGGGTCAAGAAGGTCGCTGGCGGTCATCACGGTGGCGCCTGGAAGATCGCCTTCGCCGACTTCGCCACGG CGATGACGGCGTTCTTCCTGGTGATGTGGCTGATGAGTTCGGCCACGCCGGAACAGAAGAAGCTGATCTCCGGCTACTTTCAGGACCCCATCGGGTTCAC CGAAAGCGCCAGCCCCCATGTCATCGATCTGGGCGGCACGCCGACGCCTTCGCCGGACCGCACCCTCAATCCCGAGCTGGAGCCGGCGCAGAGCGAGGCG CAGATCGACGCCCAGCAGGCCGAGACGTTCGCCGAGCAGATCGAGCGCGAGCGGCTGGAGTTGCTGCTGCAGGAACTGCAGAACAAGGTCGACGAGAACC CCGAGCTGCAGAAGTTCAAGGACCAGATCCTCTTCGAGATCACCCAGGACGGCCTGCGCATCCAGATCATGGATGCCGAGAACCGACCGATGTTCGCCCT CGGCAGCGCCCAGCTACAGCCTTACTTCGAGGACATCCTGCTGGCGCTGGTGGACACCATCGCCGCGGTGCCGAACAAGATCAGCATCAGCGGGCACACC GACGCCAAGCCGTTTTCCGGGCGTGGTGACTTCGGCAACTGGGAGCTGTCGGCCAGCCGCGCCAACGCGGCCCGGCGAACGCTGGTGTACGGTGGCTATC CGGAAGAGCAGATCGCGCGGGTGGTCGGCTACGCATCCTCTGCGCTGTTCGATCGCAAGGACCCGTTCAATCCGGTGAACCGTCGCATCGATATCCTTGT GCTGACCAAGAAGGCGCAGCGCTCCATCGAGGGCGAGCAGCCCGATGTGTCGCAGAAGTCCGATGCCGGCGAGGCGGCTCAGCCGCCAGCAAGCGGCGGT GGCGGTGGCGCGCCGGCGCTCAATGAGCCGTTGCAGCCGCAACAGCTGCGCGAGCGGCTGAACATCTTCGAGGATGGCGTGCTGAAGTTCAGTGAGCCCG GTGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGCCCGCTTATCAGTAGTCCGATTCCGGCAGGCTGCTGAGGATGTGCCGGTAGCTGGCCATGCGTTGCGGCTGGATGCGGCCGTCTTCCAGCGCCTTG AGCAGTGCGCAGCCCGGTTCGCGATCATGCTTGCAATCGCGGAAGCGACAGTGGCCGAGCAGCTCCTGGAATTCGATGAAGCCCGCTTCCACATCGGCGC GGCTGACGTGGCCGAGGCCGAATTCGCGAATGCCGGGTGAGTCGATCAGCTCGCCGCCACCGGGGAAGTGGAACAGTCGCGCGGTGGTGGTCGTGTGCGT ACCCTTGCCGGTCATTTCCGACAGCGCGCCGACGCGGGTGTCCACGCCCGGCAACAGGCTGTTGACCAGCGACGACTTGCCCACCCCGGATTGCCCGACG AACACGCTGACATGGCCGTCCAGGCGCGCCTTCAGCTCATCCATGCCGGCGCCGCCATGGGCCGAGACCTCCAGCAGCGGATAATCCAGTTGGCGGTACA
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Amino Acid Sequence |
>flagellar motor protein MotB
MDNTQPIIVKRVKKVAGGHHGGAWKIAFADFATAMTAFFLVMWLMSSATPEQKKLISGYFQDPIGFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEA QIDAQQAETFAEQIERERLELLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVDTIAAVPNKISISGHT DAKPFSGRGDFGNWELSASRANAARRTLVYGGYPEEQIARVVGYASSALFDRKDPFNPVNRRIDILVLTKKAQRSIEGEQPDVSQKSDAGEAAQPPASGG GGGAPALNEPLQPQQLRERLNIFEDGVLKFSEPGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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