Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACCCGGAGTAAACCGTGCGGATCAAGCTGGTCGCGGTCGGCTCGAAGATGCCGCGCTGGGTCGAGGACGGCTGGCAGGAATACGTCAAACGCCTGCCGTC CGAGCTGCCGCTGGAGCTGCACGAAATCCCGCTCAACACCCGTGGCAAGAACGCTGACGTGGCACGGTTGATTCGCCAGGAAGGCGAGGCCATGCTGGGC AAGGTCCAGCCGGGCGAGCGTATCGTCACGCTCGAGGTGCACGGCAAACCCTGGAGCACCGAGCAGCTGGCCGCGGAACTCGAACGCTGGCGGCTCGATG CTCGCAACGTCAACCTCATGGTGGGCGGCCCGGAAGGGCTGGCACCTGAGGTCTGTGCACGCAGCGAGCAGCGCTGGTCGCTGTCGCCGCTGACCCTGCC GCACCCGCTGGTACGAATCCTGATCGGCGAACAGATCTATCGCGCCTGGACGTTGCTGTCCGGTCACCCCTATCACAAGTAGTACGCGAACGCCTTCGAT
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DNA Sequence for Gene |
>PSTAB_3736
|mrdA
ATGCCGCAACCGATTCAGCTCAAGGATCATGAAAAGGACGCCGTGCTGGTGCGCCAACGCGTGATCGTGGGCCTCGTTTTCGTGCTGCTGCTGATCGGTG TGCTGGTGGCGCGCATGTACTACCTGCAGGTCGTGCAGTTCGAGCACCACTCGACGCTGTCGGAGAACAACCGCGTTCACGTGCAGCCGATCCCGCCCAA CCGCGGGCTGATCTTCGACCGCCAGGGGCGGGTCATCGCCGACAACCGCCCGAGCTTCAGTCTGACCGTCACCCGCGAGCGCGCTGGCGACTGGCGGGTC GTGCTCGACGCGGTGGTGGAGATTCTGGAGCTGGGCGAGGAGGAGCGCGGGCTGTTCGAGAAGCGCGTGCTGCAGGGGCGGCGGCCGTTCGAGCCGGTAC CGATCATGTACGAGCTGTCCGAGGAACAGATCGCCCGTATCGCGGTGAACCAGTTCCGTCTGCCGGGCATCGAGGTGGCGGCGCAGCTGGTCCGTCATTA TCCGCAGGGGCCGCATTTCGCCCATTCGGTAGGCTACGTCGGGCGGATCAACGAGCAGGAGGTCAAGCAGCTCGACCCGGTCAACTATGCCGGCACGCAC CACATCGGCAAGACCGGCATCGAGAAGTTCTACGAGGACGAGCTGCACGGCCAGGTCGGCTACGAGGAAGTCGAGACCAACGCCCGCGGACGGGTCCTGC GGGTGCTCAAGCGGACCGATCCGATACCCGGCAAGGACATCACCCTGTCCCTCGATCTGGATCTGCAGGAAGCCGCCGAGGAGGCGCTGGGCGGGCGCCG TGGTGCGATCGTCGCGCTGCTGCCGGACACCGGCGAGGTGGTGGCGATGGTCAGCCAGCCAAGCTTCAACCCCAACCTGTTCGTCACTGGTATCAGCTTC AAGGACTATGGCGAGCTGCGCGACTCCATCGACCGGCCGCTGTACAACCGCGTGCTGCGCGGGCTGTATCCGCCGGGCTCGACCATCAAGCCGATGATGG CGGTGGCCGGCCTCGATGCCGGGGTGATCACGCCCACCAGCCGGGTCTTCGACCCGGGCTTCTTCCAGCTGCCCAACGTGCAGCACAAGTACCGCAACTG GAATCGCAGCGGCGACGGCTGGGTCGATCTCGACCTGGCCATTGCCCGTTCCAACGACACCTATTTCTACGACATGGCGCACAAGCTGGGCGTCGATCGC ATGTACGACTACATGACCCGCTTCGGTCTTGGCCAGCGCGTGTCGCTGGACATGTACGAGGAAACCGCCGGGCTGATGCCGTCGCGTGACTGGAAGCGGG CGCGTTATCGCCAGCCCTGGTATCCCGGCGAGACGGTCATTCTCGGCATCGGTCAGGGTTACATGCAGGCCACGCCACTGCAGCTGGCTCAGGCCACGGC GCTGATGGCGACCCGCGGCAAGTGGATTCGCCCACACCTGGCGCGCAGCATCGGTGGCGAGCCGCCGGTGGATCCGGAACCGCTGCCGGATATCCAGCTG CGCGATCCGCGCTTCTGGGATTACGCGACCCACGGCATGGAGCAGGTACTGCACGGCGCCCGGGGTACGGCGCGGAAGGTCGGCGAAAGCTCGGTCTATC GCATCGCCGGCAAGAGCGGTACTGCACAGGTCGTGGCGATCCGCCAGGGCGAGAAATACGACAGTGCCAAGCTGGCCGAGCGCCATCGCGACCATGCCCT GTTCGTTGCCTTTGCCCCGGTGCATGACCCGAAGATCGCGGTGGCGGTGATGGTGGAGAACGGCGAGTCCGGTTCCGGCGTCGCCGCACCGGTGGCCAAG CAGGTGATGGATGCCTGGCTGCTCGACGAGGAGGGCAAGCTCAAGGCCGAGTTCGCGCCGCCGCTGACTGCCGAAGGGAAGAAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCAATTTCGACCGTACCCTGTCCCGCGAGGACGTGTTGCGCCGCCGCGCCAGCCTGTTGCAGCGCCTGCATATCGACGGGCTGCTGCTGGTGCTGCT GCTGGTACTGGCCGCCGGCAGCCTGTTCATCCTCTATTCGGCCAGTGGCAAGAACTGGGATCTGGTCATCAAGCAGGCCACCTCCTTCGGACTCGGCCTC GGCGCCATGCTGGTGATCGCCCAGTTCGAGCCGCGGTTCATGGCGCGCTGGGTGCCGCTGGGCTATCTCGGCGTCGTGGCGTTGCTGGTCGCGGTCGAGG TGGCCGGACACACGGCGATGGGGGCGACGCGCTGGATCAACATCCCCGGCGTGATTCGTTTCCAGCCGTCGGAATTCATGAAGATCATCATGCCGATGAC GATCGCCTGGTACCTGTCCTCGCGCAGCCTGCCGCCCAGCATCAAGCACACCGCGATCAGCCTGTCACTGATCTTGGTGCCCTTCGTGCTGATCCTGAAG
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Amino Acid Sequence |
>penicillin-binding protein 2
MPQPIQLKDHEKDAVLVRQRVIVGLVFVLLLIGVLVARMYYLQVVQFEHHSTLSENNRVHVQPIPPNRGLIFDRQGRVIADNRPSFSLTVTRERAGDWRV VLDAVVEILELGEEERGLFEKRVLQGRRPFEPVPIMYELSEEQIARIAVNQFRLPGIEVAAQLVRHYPQGPHFAHSVGYVGRINEQEVKQLDPVNYAGTH HIGKTGIEKFYEDELHGQVGYEEVETNARGRVLRVLKRTDPIPGKDITLSLDLDLQEAAEEALGGRRGAIVALLPDTGEVVAMVSQPSFNPNLFVTGISF KDYGELRDSIDRPLYNRVLRGLYPPGSTIKPMMAVAGLDAGVITPTSRVFDPGFFQLPNVQHKYRNWNRSGDGWVDLDLAIARSNDTYFYDMAHKLGVDR MYDYMTRFGLGQRVSLDMYEETAGLMPSRDWKRARYRQPWYPGETVILGIGQGYMQATPLQLAQATALMATRGKWIRPHLARSIGGEPPVDPEPLPDIQL RDPRFWDYATHGMEQVLHGARGTARKVGESSVYRIAGKSGTAQVVAIRQGEKYDSAKLAERHRDHALFVAFAPVHDPKIAVAVMVENGESGSGVAAPVAK QVMDAWLLDEEGKLKAEFAPPLTAEGKKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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