Pseudomonas aeruginosa AZPAE13757, NQ34_RS17150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGACCAGACAAGACCATCCGGTCACTCTTAGACCTTCGTGTAGTAGTCTTGAAAAAACACTACAAAACGTTTGACGACGGATTTTTTCCAGAGCATGA TGGCCCCGCTCCCGCTAATCAGGGGCTCTGAAACGACGAGCTCCCGGTGCCTGCGCCGATACGCCCTCGGCCTCCACCGTGTTGATCTGCCCACAAGGCG GCTTGACGAGATTGCGACTGGAACGAAGTTGTCCTGAGGGACGGGGAAGCGTTTACGTATCAGCCAGATCGAAAGACTCGACAGCGAGTCGCCCACCGGC AACCACGAGCCGAACGGCACTTGATCCAGTCGAGAAGCACGGTCCGCGAACTGTTCGTCTCCACCCCCTCCTCGGCGTCATTCTTCGCCACGGTCATTCT CTCGCCATGCAGCGGTGAGCCACCCGCAAGACAACCTTCACCAGCAGGTTTTGAGTGGGTCAGTCGGTGCTCAACCAATACATTTCTTGAAGGATTGACC
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| DNA Sequence for Gene |
>NQ34_RS17150
ATGTCCGCATATCAGAACGAGATCAAGGCAGTTGCCGCGCTGAAAGAGAAGAACGGCAGCAGCTGGAGCGCGATCAACCCCGAGTACGCAGCTCGCATGC GTATCCAGAACCGCTTCAAGACCGGCCTGGATATCGCCAAGTACACCGCGGCCATCATGCGCAAGGACATGGCCGAATACGATGCGGACTCCTCCGTCTA CACCCAGTCGCTGGGTTGCTGGCACGGCTTCATCGGGCAGCAGAAGCTGATCTCGATCAAGAAGCACCTGAAGACCACCAACAAGCGCTACCTCTACCTG TCCGGTTGGATGGTCGCCGCGCTGCGCTCCGACTTCGGCCCGCTGCCGGACCAGTCCATGCACGAGAAAACCGCGGTTTCCGGCCTGATCGAAGAGCTGT ACACCTTCCTGCGCCAGGCTGACGCCCGCGAGCTGGACCTGCTGTTCACCGGCCTGGACGCTGCCCGCGCCGCTGGCGACAAGGCCAAGGAAGCCGAGCT GCTGGCCCAGATCGACAACTTCGAAACCCACGTGGTGCCGATCATCGCCGACATCGACGCCGGCTTCGGCAACGCCGAGGCGACCTACCTGCTGGCCAAG AAGATGATCGAAGCCGGCGCCTGCTGCATCCAGATCGAGAACCAGGTGTCCGACGAGAAGCAGTGCGGCCACCAGGACGGCAAGGTCACCGTTCCGCACA TCGACTTCCTCGCCAAGATCAATGCCGTACGCTACGCCTTCCTCGAGCTGGGCGTGGACGATGGCGTGATCGTCGCCCGTACCGACTCCCTGGGCGCCGG CCTGACCAAGCAGATCGCCGTGACCAACGAGCCGGGCGACCTGGGCGACCTGTACAACTCCTTCCTGGATTGCGAAGAAATCTCCGAGGCCGAGCTGGGC AACGGCGACGTCGTGATCAAGCGCGAAGGCAAGCTGCTGCGTCCGAAGCGCCTGGCTTCCAACCTGTTCCAGTTCCGCAAGGGCACCGGCGAAGATCGCT GCGTCCTGGACTGCATCACCTCGCTGCAGAACGGCGCCGACCTGCTCTGGATCGAAACCGAGAAGCCGCACGTCGGCCAGATCAAGGCAATGGTCGATCG CATCCGCGAAGTGATTCCGAACGCCAAGCTGGTCTACAACAACAGCCCGTCCTTCAACTGGACCCTGAACTTCCGCCAGCAGGTGTTCGATGCGTTCGTC GCCGAAGGCAAGGACGTTTCCGCCTACGACCGCAACAAGCTGATGAGCGTCGAGTACGACGACACCGAGCTGGCCAAGGTCGCCGACGAGAAGATCCGCA CCTTCCAGCGCGATGGCTCGGCCCACGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACCGCCGCGCTGTCCACCGACAACCTGGCCAA GGGCTACTTCGCCGACGAAGGCATGCTGGCCTACGTGAAGGGCGTGCAGCGCCAGGAACTGCGCCAGGGCATCGCCTGCGTCAAGCACCAGAACATGGCG GGCTCCGACATCGGCGACAACCATAAAGAGTACTTCGCAGGCGAAGCCGCTCTGAAGGCCAGCGGCAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAACAGGGGCCAGCCGGGCAGCCACGATCTGCCCGGCCCGCCTCGCGAAAACCCCGGCTCCGGCCGGGGTTTTTCATTTCCGGATCATGGCAAAAGGCC TCGAGTGCCTGTCATCGTCCCGTCGCTTTCAGCGGTTAGCGTCAATGCTCCGTCGATCAGCCCACAAGGAGCACGTCCGTGAGCCTGGAGAAAAAAGATG CCATCCTGTTCGGTGATGGCGACGAGTTGCCCAGCAACCATTCGAACAACCCGCACATGAACGACCTGATCGCCGGCCTCGGCCGCCGCCAGGTCCTGGC CGGCGGCGCGGCGCTCGGCGCCCTCGCCTTCCTCGGCGTCGCGCTCCCCGCCAGCGCCGCTCCCGCCGAAGCGCAGGTGCCCGCCGCGGAAGACCTGCGC GGCTTGCCTTTCAAACGCCGCAACCGCTTGCCCTTCGAAGCCATCGCCAGCGGCCGTGCCGATACCATCCGGGTGCCCGCCGGCTACAAGGCGACGCCCT
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQNEIKAVAALKEKNGSSWSAINPEYAARMRIQNRFKTGLDIAKYTAAIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYL SGWMVAALRSDFGPLPDQSMHEKTAVSGLIEELYTFLRQADARELDLLFTGLDAARAAGDKAKEAELLAQIDNFETHVVPIIADIDAGFGNAEATYLLAK KMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHIDFLAKINAVRYAFLELGVDDGVIVARTDSLGAGLTKQIAVTNEPGDLGDLYNSFLDCEEISEAELG NGDVVIKREGKLLRPKRLASNLFQFRKGTGEDRCVLDCITSLQNGADLLWIETEKPHVGQIKAMVDRIREVIPNAKLVYNNSPSFNWTLNFRQQVFDAFV AEGKDVSAYDRNKLMSVEYDDTELAKVADEKIRTFQRDGSAHAGIFHHLITLPTYHTAALSTDNLAKGYFADEGMLAYVKGVQRQELRQGIACVKHQNMA GSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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