Pseudomonas aeruginosa AZPAE13757, NQ34_RS16405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGCCAGGCCGAGATAGCCCTCCCAGGACAAACGGCGCACCGGGAAACCGGCCCAGCCGAACTGGTCGCAGAGCGCCGAGACCAGCATCTGCCCGGC CACCACGCACGCGATGAAAGTGGCGGCACCCAGGCGCGGCGCGACCAGGATCGCCACCGTCAGGTAGGCCGCGCCGAACAGCCCGCCGAGCCAGCTCCAC CAGGGCGCGCCGCCGAGGCTGGCGGTAGCCGGCAGCGGCACCCGCACCAGCAGCAGGCCCAGGCTGACCACCCCGAGGCTGACGCCCAGCGAAGTCAGGC TGGCGCTCAGCGGATGGCCGAGCAGGCGCCCGAGCAAGGCGTTGCTGCCGGCCTGCAGCACCACCATGCCGCCCACCGAAACTGCCATCAGTACCATCAG ATAATTGGGCATGCTGATTCTCCTCCTCCGGCCCTTGCCTCTGGAGCAGAGTTTTTGCTATCCACTTCGCGAATGGAAATCGATAGTTGGTACACCTTCC
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| DNA Sequence for Gene |
>NQ34_RS16405
ATGCAGCAGATTCATGACCTACGCCGTATCGACCTCAACCTGCTGGTGGTGCTCGACGCGCTCCTCAGCGAGCGCCACGTGTCCCGCGCGGCGCAGCGCC TGGCCATGTCGCAGCCGGCGGTCAGCCACGCCCTCGGGCGTCTCCGCGAACTGTTCGGCGATCCACTGCTGGTGCGGGTGAAAAGCCGCATGCAGTTGAC CAGCCTGGCGCTGGAGCTGGCGCCGAAGCTCCAGGCCAGCCTCGACCAGGTACGCGGGGTGATCGGCGGGCCGACCTTCGAACCGGTGCGCAGCCGACGC CACTTCCGCCTGGGCATGTCCGACTACGGCGCCTGGGTGGTGCTGCCGGCGCTGCTGCGCCAGCAACAGGCGCTGGCGCCCGGGGTGAGCTTCGGGATAG TCCAGGAACCGCGCCTGGAAACCGCCCGTCAGGTCGCCGAAGGACAGCTGGACTGCGCGCTGGGGGTATTCCCCCTGCTTCCGGAGGGCGTGCGCGCCAG GCGCCTGTTCGAGGAGCGTTTCGTCTGCGTCTGTCGGCGCAGCCTGTTCGACCGCCCCGACGGCCTGTCCCTCGACCGCTACCTGGCGGCCCGCCACGTG CGCGTCTCGCTACAGGACAACCCGGCCGAGGAAGTCGACAGCGCCCTGGAAAAACGCGGCCTGCGCCGGCAGGTGGCGCTGACCCTGCCGCACTTCACCG TGGCCCCGGCGCTGCTGGCCGGCACTGACCTGGTACTGACCATCGCCGAACGCACCCTCGAAAGGTTGCGGCTACCCGAGGAACTGGCGCTCTGCGAGCC GCCGCTGGCGATCCCGCGCTTCGACTATGTGCAGATCTGGCGCGGCGACGCCGAGCGCGAAGCGGCCGGCGCCTGGCTGCGGGAACAGATCCAGGCGGCG GCGCGGAAGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAAGAGTCAGGAAGGCTTTTCCAGCTTGCGCAGCATCTCGCCGACACGCTCGCCGAGCATTTCGTTGGCCGACAGCTTGAGGCCGCGCGCCAGTTCCAC CTGGACCACGTGTTCCGCCAGCGGGCGCAGGCGCAGGAACACCTTGGCCAGCTCCTGCAGGTCCGGCGCCCCGGGCAGCAGGTCGGTGCCGCGGCCGTCC ACCAGGTGGGTGACGATCAGGCGGACGATTCCCGCCGCCAGATGCTCGGTGTCGCTGCGCAACTCGCCGAGTTGATCGAGCAGCGCCTCCAGCGGGATGC CGCTGCGGTACAGTTCCAGCCCGGCCTGGAACAGCCGCGGACTGGGGATCTTCATGCGCTCGCCGTCGAACAGCAGCAGGCCCAGCGCCTGGGCCTTGTC GATCACCCGGTCGTTCAGTTCGTCGCCGAAGATCGCCTGGAGTTCGTCGAAGCCGATGCTGCCGGGCGTCTCCAGGTTCCACTCGCCGATGATCGCCTGG
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| Amino Acid Sequence |
>transcriptional regulator
MQQIHDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRMQLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRR HFRLGMSDYGAWVVLPALLRQQQALAPGVSFGIVQEPRLETARQVAEGQLDCALGVFPLLPEGVRARRLFEERFVCVCRRSLFDRPDGLSLDRYLAARHV RVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTVAPALLAGTDLVLTIAERTLERLRLPEELALCEPPLAIPRFDYVQIWRGDAEREAAGAWLREQIQAA ARKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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