Strain | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGCCAGCCTCGGCGGCGCGCCCTGGTGGAGCTGGCTCGGCGGGCTGTTCGGCGCGGCCTACCTGACGGTGGCGATCCTGGTCGCGCCGCGCCTGGGTG CCGCCACTTTCATCGCGTGCGTGGTGGCCGGGCAGATGCTGGTCTCGGCGCTCTGCGACCAGTTCGGCTGGGCCGGTTTCCCGGTGCGCCGTTTGTCCTG GGAGGGCTATCTCGGCCTGGCGCTGGTGGTGGCGGGGGTATTGCTCCTGCAATGGCGGGGAAGAGCGTGAGGAGAGTGCCGGCGAAGGCTGTCAAGTGGA ATCTGGCCTAGACCAAAATCTTGATCTCAAATTGTGATGAAGTTGGCATGAGTAGTTGTTGCAAAGCGTGTTGAAACCAAAGCGTCTTTTTCCCTCACTA GCGTCGTCGGGGTTCGAACAGCTTGCTGCCGAGTGAGCCTGCGGGCGTCATGGATGCGCTCGGCAGCCCTGTGCCACACCCTGACCTGGTGAGTCCCCCG
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DNA Sequence for Gene |
>NQ34_RS16395
ATGATTTCGAAAAGCAGAAGAAGCTTCATCCGCCTGGCCGCCGGTACGGTCGGCGCCACCGTCGCCACCAGCATGCTGCCGTCGAGCATCCAGGCGGCCC TGGCGATTCCCGCGCACCGCCGGCATGGCAACCTCAAGGACGTCGAGCACGTGGTGATCCTGATGCAGGAGAACCGCTCCTTCGACCACTATTTCGGCAC CCTCAAGGGCGTCCGCGGCTTCGGCGACCGCATGGCGATCCCGCTGCCCGATGGCCAGCGGGTCTGGCACCAGAAGGGCAGCAAGGGCGAGATCCTGCCC TACCACTTCGACACCAGCACCACCAGCGCCCAGCGCGTCGACGGCACCCCGCACACCTGGCCGGACGCCCAGCAGGCCTGGAACGAAGGGCGCATGGACA AGTGGTTGCCGGCCAAGACCGAGCGTTCCCTGGGCTACTACAAGAAGCAGGACATCGCCTTCCAGTTCGCGATGGCCAACGCCTTCACCATCTGCGACGC CTATCACTGCTCGTTCCAGGGCGGCACCAACCCCAACCGGCTGTTCCTCTGGACCGGCACCAACGACCCGCTCGGCCAGCACGGTGGTCCGGTAACCACC AACGACCACGACAGCAACGGCCCGGTGGAGCAGGGCTACACCTGGACCACCTATCCCGAGCGCCTGCAGGCTGCCGGCATCACCTGGCGGGTCTACCAGG ACATGGCCGACAACTTCTCCGACAACCCGCTGATCGGCTTCCGCCAGTACCGCGCCGCGGCGCCTGACTCGCCGCTGATCGTCAACGGCCTGAGCACCTG GAAGCTCGATGCGCTGAAGCGCGACGTGCTGGCCAACAGCCTGCCGCAGGTGTCCTGGATCGTCGCCCCGGCCAAGTACTCCGAACACCCCGGCCCGTCC AGCCCGATCTGGGGGGCCGAGTACACTTCCTGGGTACTCGACGCGCTGACCGCCAACCCGGAGGTCTGGAGCAAGACCGCGCTGCTGGTGATGTTCGACG AGAACGACGGCTTCTTCGACCACGTCGCCCCGCCGGCCGCGCCGAGCCTGAACAAGGACGGCACGCTGCGCGGCAAGACCACCGCCGACGCCACCCTCGA ATGGCACACCAAGGGCGATATCCGTTATCGCAACCAGCCCTACGGCCTCGGCCCGCGGGTGCCGATGTACGTGATCTCGCCGTGGAGCAAGGGCGGCTGG GTCAACTCCCAGGTGTTCGACCACACCTCGGTGATCCGCTTCCTGGAGCAGCGCTTCGGGGTCATGGAGCCGAATATCAGTCCCTGGCGTCGTGCCGTCT GCGGCGACCTGACCTCGGCGTTCAACTTCGCCAACCCGAACAACGAGCCGTTCCCCGAACTGCCCGACACCAGCCAGGCCGACGCCATCGTCGCCAGCCA GATCAAGCTGCCGAAGCCGAAGCCGCCGGCGGTGGCCGCCATGCCCAAGCAGGAAATGGGCATCCGTCCGGCCCGCGCCTTGCCCTACGAGCTGGGTGTG CATGCGCGCTACCGCAGCGGCGGAGATGCGCTGAGCCTGACCTTCGCCAACACCGGCAAGGCCGGCGCGGTGTTCCAGGTGTTCGACCTGCTCGACAGCG AGAGCCCGCCGAAACGCTACACCGTCGGCGCGCGCAAGCGCCTGCACGACAGCTTCCAGGGCGACGCCAGCGGCGACTACCACCTGGAAGTGCACGGTCC GAACGGTTTCCTCCGGGTCTTTCGCGGCAACCTGCGGCGCGACCTGGCGGAGCGCAAGGCGCCGCTGCCGGAAGTGCGGATCGACTACGAGCCGCTGTTC GGCAACCTGCGCGTGCAACTGATCAACCGTGGCCGCCATCCGGTCAAGCTGACGGTCAAGGACAACGTCTATCGCCAGGGCGAGCGGCGTACCGTCAACG TGCCGCCGGGACAGCGCCGGGAAGTCCGCTATTCGCTGCGCAGCAGCGGCAACTGGTACGACTTCAGCGTCAGCGCGCAGGGGGCGGACAGCTTCCTGCG GCGTTTCAGCGGTCGCATGGAAGATGGTCGCTCCGGCTTCAGCGATCCGGGCATGGGCCTGGGCACGCTGACCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGGACGGCCGCGCCGGCTCCCTGCAATGGGGCGGCCGGCGCGGACGGCCTGCGCCCTAGTCGAGGGGAGCCGGGTAGAGGGTATTGAGGATCCACTTG CCGTCCTTCAGGACGAAACCGTACGAAATCTCCTTGGCCATGTACGTATCCCAGCGCGTGCAGGCGCCCTGGCCGTCGGCCTGCTTGCAGGAGTAGGCAT CGATCTTGCCCATGTGCAGCTTCTCCAGGGAAACCACCTGGAACTTGCTGTTGCCGCTGCAGGCCACCGGATTGTCGATGTATCCGTACTGGCGCCAGGC CGCGTCGTAGTTGCCTCTCGACTTGAACAGGGTCTTGTCTTTCTGCGACGAGCCGGACGGCGGCGTCATCCCGTAGATGTGCTGGGTCACGTGGCCGCCC ATCGAGGTATTGCGCGTGGCGTCGGCGCTTTGCTGCACGCTGGTGATGTCGCGGCAGGCGGCGGCGTTGGCCGAGGAGGCCAGCAGCAGAAGGGCGGAGA
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Amino Acid Sequence |
>phospholipase C
MISKSRRSFIRLAAGTVGATVATSMLPSSIQAALAIPAHRRHGNLKDVEHVVILMQENRSFDHYFGTLKGVRGFGDRMAIPLPDGQRVWHQKGSKGEILP YHFDTSTTSAQRVDGTPHTWPDAQQAWNEGRMDKWLPAKTERSLGYYKKQDIAFQFAMANAFTICDAYHCSFQGGTNPNRLFLWTGTNDPLGQHGGPVTT NDHDSNGPVEQGYTWTTYPERLQAAGITWRVYQDMADNFSDNPLIGFRQYRAAAPDSPLIVNGLSTWKLDALKRDVLANSLPQVSWIVAPAKYSEHPGPS SPIWGAEYTSWVLDALTANPEVWSKTALLVMFDENDGFFDHVAPPAAPSLNKDGTLRGKTTADATLEWHTKGDIRYRNQPYGLGPRVPMYVISPWSKGGW VNSQVFDHTSVIRFLEQRFGVMEPNISPWRRAVCGDLTSAFNFANPNNEPFPELPDTSQADAIVASQIKLPKPKPPAVAAMPKQEMGIRPARALPYELGV HARYRSGGDALSLTFANTGKAGAVFQVFDLLDSESPPKRYTVGARKRLHDSFQGDASGDYHLEVHGPNGFLRVFRGNLRRDLAERKAPLPEVRIDYEPLF GNLRVQLINRGRHPVKLTVKDNVYRQGERRTVNVPPGQRREVRYSLRSSGNWYDFSVSAQGADSFLRRFSGRMEDGRSGFSDPGMGLGTLTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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