Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3509 (nirE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019354 siroheme biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01469
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01469
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psz01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psz00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01469 JCVI: uroporphyrinogen-III C-methyltransferase IPR006366 Uroporphyrin-III C-methyltransferase 18 253 5.3E-89
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 20 230 1.1E-47
CDD cd11642 SUMT IPR006366 Uroporphyrin-III C-methyltransferase 23 251 2.76796E-126
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 16 263 1.57E-80
PANTHER PTHR45790 SIROHEME SYNTHASE-RELATED - - 15 254 7.1E-95
FunFam G3DSA:3.30.950.10:FF:000001 Siroheme synthase - - 134 267 4.2E-45
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 9 133 7.4E-40
FunFam G3DSA:3.40.1010.10:FF:000001 Siroheme synthase - - 14 133 1.0E-48
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 134 266 7.3E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.