Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3504 (nirS)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0009055	electron transfer activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psz01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psz00910	Nitrogen metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase	IPR011048	Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily	172	596	1.57E-127
Gene3D	G3DSA:1.10.760.10	-	IPR036909	Cytochrome c-like domain superfamily	54	170	1.7E-31
FunFam	G3DSA:2.140.10.20:FF:000001	Nitrite reductase NirS	-	-	172	597	0.0
Gene3D	G3DSA:2.140.10.20	-	IPR003143	Cytochrome cd1-nitrite reductase, C-terminal domain superfamily	171	597	0.0
SUPERFAMILY	SSF46626	Cytochrome c	IPR036909	Cytochrome c-like domain superfamily	32	188	1.53E-22
Pfam	PF02239	Cytochrome D1 heme domain	-	-	200	592	0.0
Pfam	PF13442	Cytochrome C oxidase, cbb3-type, subunit III	IPR009056	Cytochrome c-like domain	89	163	9.3E-11
FunFam	G3DSA:1.10.760.10:FF:000027	Nitrite reductase	-	-	63	170	3.7E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.