Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3371 (dnaJ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAGATGGTGCGCGACGCCGAGGCCAATGCCGAGGAAGACCGCAAGTTCGAGGAGCTGGCTACCGCACGCAACCAGGGCGATCAGCTGGTGCATGCCAC CCGCAAGATGCTCACCGAAGCCGGCGACAAGGCCAGCGACGATGACAAGGCTGCGATCGAGAAGGCGCTCGGCGAGCTGGAGCTGGCCATCAAGGGCGAC GACAAGGCTGCGATCGAAGCGAAGATCGCTGCGGTGTCCCAGGCTTCCACTCCGGTTGCGCAGAAGATGTACGCCGAGCAGGCTCAGGCCGGTGAAGGTC AGCCCGCAGGTGAGCAGGCGAAGCCGGGCGACGACGTGGTCGATGCCGAGTTCGAAGAGGTCAAGGACAACAAGTAATCCCCGGCTTGCTTCCGCTCCAG CCCGCCCTCGACGTCGTCGGGGCGGGCAAGACCGCCACGCGGGGGCTTGCTCCCGCGTCGGCGTGTCTGGAAGGCATGAAATTGAGGGTTCAGGATAGTT
|
|
| DNA Sequence for Gene |
>PSTAB_3371
|dnaJ
ATGGCCAAACGCGATTTTTACGAGGTGCTGGGCGTTGAGCGCGGTGCCAGCGAGGCGGAGCTGAAAAAGGCTTACCGCCGCCTCGCCATGAAGCATCACC CCGACCGCAATCCGGGTGACAAGGCGGCGGAGGAAGCCTTCAAGGAGGCCAACGAGGCCTACGAGGTGCTTTCCGACCCGAGCAAGCGGGCTGCCTACGA TCAGTACGGGCACGCCGGCGTCGATCCGCAGATGGGCGCCGGGGCAGGCGGAGCCGGTTACGGCGGCGCCAACTTCTCCGACATCTTCGGCGATGTATTC AGCGATTTCTTCAGTGGCGGTCGTGGCGGCTCCCGCGGTGGCGCTCAGCGCGGCAGCGACCTGCGTTACACGCTGGAGCTGGATCTGGAAGAAGCCGTGC GCGGCACCACGGTGACCATCCGCGTGCCGACCCTGGTCGAGTGCAAGACCTGCGATGGCTCCGGGGCAAAGAAAGGCACCAGCCCGGTGACCTGTACCAC CTGCGGCGGCATCGGTCAGGTGCGCATGCAGCAGGGCTTCTTCTCGGTACAGCAGACCTGTCCGCGCTGCCATGGCAGCGGCAAGATGATTTCCGACCCC TGTGGCAGCTGCCACGGCCAGGGCCGTGTCGAAGAGCAGAAGACGCTCTCGGTCAAGGTGCCGCCAGGCGTGGATACCGGCGACCGCATCCGCCTCTCCG GCGAGGGCGAGGCCGGAACCCAGGGCGGGCCGGCGGGCGACCTCTACGTGGTGGTCAACGTGCGCGAGCACGCGATCTTCCAGCGCGACGGCAAGCACCT GTACTGCGAAGTGCCGATCAGCTTCGCCGATGCGGCGCTGGGCGGTGAGCTCGAGGTGCCGACGCTGGATGGCCGGGTCAAGCTGAAAATCCCGGAAGGC ACCCAGACCGGCAAGCAGTTCCGTCTGCGGGGCAAGGGTGTAGCGCCGGTGCGCGGTGGTGCGGCGGGCGACCTGATGTGTCGCGTCGTGGTCGAAACGC CGGTCAACCTGAGCAAGCGCCAGCGCGAGATGCTCGAGGAGTTCCGCGGCACGCTACAGGGCGACACCTCCCATTCACCCAAGGCCAGCGGCTGGTTCGA GGGTGTGAAGCGCTTTTTCGGTGATGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCGAACTGAGGGCTTGAGGTCCGGTGCCTGGTGCATCGGCCTCGCGCTCGGTTTCCGGCTTGCAGCTTGGAGCTGATGCTATGCGACGTATTGCAGTGA CGGGCGCCGCCGGGCGCATGGGCAAGACCCTGATCGAGGCGGTGCAGCAGACTGGCGGCGTCGCCGGTCTGACCGCTGCCATCGATCGGCCGGACAGTAC CCTGGTGGGTGCCGATGCCGGCGAACTGGCCGCCATCGGGCGGCTGGGCGTGCCGCTGACGGGAGATGTCGGCAAGGCTGTCGACGAGTTCGACGTGCTG ATCGACTTCACTCACCCTTCGGTGACGCTGAAGAACCTGGAGGTCTGCCGGCGCGCCGGCAAGGCCATGGTGATCGGTACCACCGGCTTTTCGCCGGAAG AGAAGGAGCGCCTGGTGGCGGCGGCCAGAGAGATCCCGATCGTCTTCGCCGCCAACTTCAGCGTTGGCGTCAATCTGTGCCTCAAGCTGCTGGATACCGC
|
|
| Amino Acid Sequence |
>heat shock protein
MAKRDFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKRAAYDQYGHAGVDPQMGAGAGGAGYGGANFSDIFGDVF SDFFSGGRGGSRGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKTCDGSGAKKGTSPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMISDP CGSCHGQGRVEEQKTLSVKVPPGVDTGDRIRLSGEGEAGTQGGPAGDLYVVVNVREHAIFQRDGKHLYCEVPISFADAALGGELEVPTLDGRVKLKIPEG TQTGKQFRLRGKGVAPVRGGAAGDLMCRVVVETPVNLSKRQREMLEEFRGTLQGDTSHSPKASGWFEGVKRFFGDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|