Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCGCCGACGGCACGGTCGTCAGCGGCCAGCAGTACGAAGGCGACCCGATGGACCGCGTGCCGCTGCTGGCGATCAAGCGGCCCGGGCAGCCCTTCCAGC ACTTCCCGCTGGGCGAGGCGCAGCGGCAGATCATGAACCAGTACACCGCCAGTCTGGCCATCCACGACGAGCTGCGGCTGCTGGCCGTCACCGCGCCACG CGGCAACAAGGTGTTCATCTGGGACCTGGACAGTGCCGCGCTGCGCCAGGAGGCTCACCTGCCCGATTGCGCCGGCGTCGCGGCAGTCGCCGAGGGCTTC GTGGTCAGCTCCGGACAGGGCCGCTGCCGCCTGTTCGACTGCCGCGGCGAGCGTTTCACCAGTACGCCGCTGCAGATGCCGGCAGGGCTCTGGGACAACC ATCTGCGCATCGTCTAGCTCAAGAAACACGTCACTCGACCGATGTGCTGGACAACGGCAGGGATGCTCATTGACGTTTCTCAAACGACGAGACCTTGCCC
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DNA Sequence for Gene |
>PSTAB_3188
ATGCTCCAGAAGTCCCTGCGCGCGCAGATCCTCGCGCTGATCGGCGGCAGCCTGCTGCTGACGCTCCTCATCGCCCTCGGCTGCATCCGCATGCTCAGCA GCGATATCGACCAATTCCAGACGCTGCTCGACGGGCCCCTGGCTGAGCTGCAACTGATCGACGAGGCCAACCTCGAGTTCAAGGTACAGGTGCAGGAATG GAAGAACGTACTGCTGCGCGGCAAGCAGCTCGAAAATCGCAACCGCTACTGGAGCCAGTTCGAGGCACAGGAAGCCAAGGTGCAGAAGGTTCTTGGCGAG CTGCTCGTGCTGAGTGCCGACGAACCGGCGCTGGCCGGACAGATCGAGCGCCTGCGCAACGAGCATCGAACGCTGGGCGGCGCCTACCGCAAGGGCCTGG ACGCCTTTATCGCCGCCGGCAGCGACCCGCTTGCCGGTGATGCTGCGGTGGCCGGGATCGACCGTGCCACCAGCGCCCAGCTCAGCGAACTGGTCAAGCA GCTGCATGCGGCCGCCCGGCAGCGTTCGGAGGCGATACAGGCCGATGCCGAAGCCACCGCGCTGCTCGGCCCGGTCATCATGATCCTGGCCGGCGTGGTG GTGGCGCTACTCAGCCTGTGGCTGGTCAATCGACGCATCATCGAGCCGATCCGCACGCTGATCGAGCACATCGCGCGTCTCAGCCAGGGCAAGTTCGCCG AGCGGGTGGACGCCAGCCGCGCCGACGAACTCGGCCGACTCGCGGTTGCCGCCAACGTGCTGCGCGATTTTCTCGCCGATACCTTCACCCGCCTACAGCA GAGCACCTCCAATCTGGACAGCGCCAGCGGCGAACTGAACGCCATCGCCAGGCTGATGGCCGATGGCGCCCGCGAGCAGTTCTCGCGCACCGATCAGGTC GCCACTGCCGTGCATGAGATGTCGGCAACTGCCCAGGAAGTCTCGCGCCATGCCGCCGAAGCGGCGCAGGCCGCCGATGCCGCCGATCACGCCGCGCAAC AGGGCGAGGCGGTGATGCGCGGCACCATCGCCAGCATCACCGACATGAGCAGCGCAATCGCCAGCACTGCCGAGGTCATTCGCCGGCTGGAGGGCGACAG CGGTCGGATCGGCAAGGTGCTGGAAGTCATCCGCGGCATCGCCGACCAGACCAACCTGCTGGCGCTCAATGCCGCCATCGAGGCGGCCCGTGCTGGCGAC GCCGGCCGCGGTTTTGCCGTGGTGGCCGACGAGGTGCGCACCCTGGCCCAGCGCACCGCCGAATCCACCGCCGAGATCCACCAGATCATCGATACCGTGC AGACCGGCGCAAGCAATGCGGTGCGTGCCATCGAGAGCGGCCAGGTGCGCAGCGAACAGGGGGTCGGCCAGGTGACCGAGGCCGGACTGATGCTGCAGCG CATCACCGAGGCCGTGGAGGCGATCCGCGACATGAACCGGCAGATCGCAACCGCGGCCGAGGAACAGACAGCGGTGGCCGAGGACATCTCGCGCAACCTC ACCGAGATCACCTCCATCGCCACCATCAACCAGCAGAACGTCGAACGCACCGAAACCGCCAGTCAGAACCTGCACGGCCTGTCGGCGCAGCTCACCGAGG ACACCCGCCGCCTCGCTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGATCAGCGGGGCGGCCCGACAGCCTGTCGCCCGCCCCGCCTTTCGGTGGCCCTGCGCCCCCTCTCCCCCTTTACTTGCTTCCGATTCGGGGCTAAGTTC CTCCCTCCCCGGTCCGGCTGCGCCAGTGCAGCCACCGTCCAAGCGACGCTGACCGGACGATCGAACGGCTGCCTCGATCACGGCAGTAGACAGCCGGCTC ACATCTCCAAGGAAATCGGAAAATGTTGCGCCGCATGCTGTTTATGCTGGGCGCGGTGGTCGTCGTCGTTGCGATCCTTGCCGCACTCAAGTTCAACTCG ATCTATCAACAGATTCAGCAGTTCCAGGCACCCAAGCCGGCGATCGATGTCGAGGCGGAAGTTGCCCGGCGCATGGACTGGCAGAGCCGCCTGCCGGCGA TCGGCACGCTCAAGGCATCGCAGGGCATCGACCTCAGCGTCGAGATCGCCGGCACCATCACCGACGTGCAGTTCCAGTCCGGCGAGAAGGTCAGCAAGGG
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Amino Acid Sequence |
>methyl-accepting chemotaxis protein
MLQKSLRAQILALIGGSLLLTLLIALGCIRMLSSDIDQFQTLLDGPLAELQLIDEANLEFKVQVQEWKNVLLRGKQLENRNRYWSQFEAQEAKVQKVLGE LLVLSADEPALAGQIERLRNEHRTLGGAYRKGLDAFIAAGSDPLAGDAAVAGIDRATSAQLSELVKQLHAAARQRSEAIQADAEATALLGPVIMILAGVV VALLSLWLVNRRIIEPIRTLIEHIARLSQGKFAERVDASRADELGRLAVAANVLRDFLADTFTRLQQSTSNLDSASGELNAIARLMADGAREQFSRTDQV ATAVHEMSATAQEVSRHAAEAAQAADAADHAAQQGEAVMRGTIASITDMSSAIASTAEVIRRLEGDSGRIGKVLEVIRGIADQTNLLALNAAIEAARAGD AGRGFAVVADEVRTLAQRTAESTAEIHQIIDTVQTGASNAVRAIESGQVRSEQGVGQVTEAGLMLQRITEAVEAIRDMNRQIATAAEEQTAVAEDISRNL TEITSIATINQQNVERTETASQNLHGLSAQLTEDTRRLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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