Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGGTGGTCAAGCCCTTCAAGAAAGTGCTGCCCTGAGCCGACACAGCGGGGATAGCGAATCCGCCCGGCTGCTGGTCTTCCACGGCCTCGTAAGGAAATA GGAGTTCCGATGCGTCAACGACCGCTTTCCCTGCTGCTTGCCCTGACCCTGCTGGCCCCTGCGCTGCAGGCTGAAGAAACATCAAGCGTTCCGACCCTGC CGGTTGACGAAGCCAGCGAAGCCGCACCGATCGAAGCGCAGCAGACCGCCACCGAGCCCCACGCGGCACGCCTGGCCAGCGATACCAGCGAAGCCCTGCT GCTGCGTCTGCGCGAGGAAAACCGCCGGCTGCGCATGCAGTTGCAAGCCGAGCAGTCGAAGGTCCTGCCGGCGCTGCTGAACGAGCAGCAGCAATGGTTC GCGGTGGGTGGAGCCGTTGGCGTCACCAGCTTCTTACTGGGCCTGCTGGTGACGCGCGGCCGGCGTCGGCGCCAGTGGCTCAATTGAGTAACAGGCAAAC
|
|
DNA Sequence for Gene |
>PSTAB_2351
ATGAGCGAATTGCTGCTTATCGATGATGATCAGGAGCTGTGCGAGCTGCTGATCAGCTGGCTCGCACAGGAAGGCTTCGTCGCCCATGCCTGCCATGACG GGCAGAGCGCGAAGCAGGCGTTGGCGCAGTATCAGCCCGCCGCGGTAGTACTGGATGTGATGCTTCCGGACGGCAGCGGTCTTGAACTGCTCAAGCAGCT GCGCAGCGAACATCCGGACCTGCCGGTGTTGATGCTGTCCGGCCGTGGCGAACCGCTGGACCGCATTCTCGGCCTCGAACTCGGTGCCGACGACTATCTG GCCAAGCCCTGCGACCCGCGCGAACTGACCGCGCGTCTGCGAGCTGTGCTGCGCCGCAGCCAACCGGCAGCCGCGCCCAGCCAGCTCGAACTCGGCGACC TCAGCTACAGCCCCGCCCGCGGCGTTGCCAGTGTCGGCGGGCATGACGTCAGCCTGACGCTGTCCGAAGGCCGCATCCTCGAGGCCCTGCTGGCCCAGGT CGGCGAGCCGATCGACAAGCAGGCCCTGGCCCAGCACGCCCTGGGTCGCAAGCTCACGCTCTACGACCGCAGCCTGGACATGCATGTCAGCAACCTGCGC CGCAAACTGGGCCCGCACGCCGACGGCAGCCCGCGGATCGTCGCCCTGCGCAGCCGTGGCTATCTCTATTCGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGCGCCCGGCTGATCGTCTTTACCGAGGCTTTACCCAGGGCTGACCGCCCTTGACCTTGCGCTGCTTAGACTGAACTCATCCGGTCACCGACCAGCCGC CAGCTTCTTCGATGCCGCGGCGGCACGACCGGTTTCCCTACATAGGAGAAGTTTCATCATGCGCAAATCACTTGTAGCCCTACTGTTCGCCGCCGCCCTG CCGACCCTCGCCTTTGCCATGCCCGGTGGCATGCACGACGGCCCCCATGGCGGCAAAAGAGCCCCCCACATGTTCCAGGACCTGGACCTGACAAAGGAAC AGCAGCGCGAAATGCGCAAGCTCATGGGCGAGCAGATGAAGCAGCGCCAGGCGATCACCCAGCGCTACCTCGACAAGTTGCCCGAAGCCCAGCGCCAGGC CATGCAGAAGGATCTGGACGCCAGTCGGGAAAAGACTCACCAGAGCATGCGCGCCCTGCTCAAGCCGGAACAGCAGAAAGCCTTCGATGAAGGCCTGAAG
|
|
Amino Acid Sequence |
>DNA-binding response regulator
MSELLLIDDDQELCELLISWLAQEGFVAHACHDGQSAKQALAQYQPAAVVLDVMLPDGSGLELLKQLRSEHPDLPVLMLSGRGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSQPAAAPSQLELGDLSYSPARGVASVGGHDVSLTLSEGRILEALLAQVGEPIDKQALAQHALGRKLTLYDRSLDMHVSNLR RKLGPHADGSPRIVALRSRGYLYSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|