Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CATGGCGAGCGCCTGGTTGACCGCGAGCCAGCCGTCTACAGACTGTTCCCCCACGTCATCGAAGGCGCGCTGTAGCAGCCTGACCTGTTCCCGGCGCAGT GCTTGCTCGAGCTTCGCTCCCTCGGCGGTGAAGCGCAGCATGCGTTTGCGCTTGTCGTCCTCCGCCGTGAGGCTTTCCACTAGATGCATTTCGATCAGTT GGCGCAATGGTGTGTTCAGCGCCTGCTTGGTAACGCCCAGGTAGCTCAGCAGTTCCTTGACGCTCAGGTCGGGATAGCTGGCGATAAAGAACAGGATGCG GTGATGCACGCGGGACAGACCGCGACGGGCCAGCATCTCGTCAGGCTTTGCCGTGAAAGCCTGATAGCCGAGAAAGAAGCTTTCCATTATCTGGCGCTGC ACGGCGCTTTTTTTTAGGTCAGGCATATTGACGTATTTATTATGAGAGGCGTAATTTCGGTCAAGAAGTTTGACTTATTTTGCAACGCCTCGCACCTGGT
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| DNA Sequence for Gene |
>PSTAB_2215
ATGGAAATGGCCTTCTCCGAACGTATTACTCGCCTGAAAAGCTCCCTGATTCGTGAAATTCTCGCCGCAGCCCAGCGTCCTGAGGTGATGTCCTTTGCCG GTGGGTTGCCGGCTGAGGCGATGTTACCCGCGGTGGATTGGGCCGAGCTGCCTGCGAGCATGGGGCAATACGGCATGAGCGAAGGCGAACCCGCCCTTCG CGAAGCCATCGCGGCTCAGGCCCGGGCGCTCGGCGTGCCCTGCGAGGCCAGCCAGGTGCTGATTGTCAGTGGGTCGCAACAGACGCTGGATCTCGCCTCG AAGCTGTTCATCGACTCGGGCACCGAGGTGCTGGTCGAGGCGCCGACCTATCTCGCCGCGCTGCAGTCGTTCCAGCTGTTCGGTGCACAGTGTCTGGCCG TTGCGCAGCAGGCTGACGGACCGGATCTGGCGGCACTGCGTTCCACGCTGGAGCAGCACGCTCCGGCTTTCGCCTACCTGATTCCGACCTTCCAGAATCC TTCTGCGGTCCGTTACAGCGAAGCCAAGCGTGAGGCCGTTGCCGGGCTGCTGGATGAATACGGTGTGACCTTGCTGGAGGACGAGCCGTACCGTGAACTG GTGTTCGACCAGGGCAGTGCCAGGCCCATCGTGTCGCGCCTCAAGCGGGCCAGCTGGATCTACACCGGCACGGTATCCAAGACGCTGCTGCCCGGTTTGC GGGTAGGCTACCTGATCGCGTCTGCGGACCTGTTTCCTTATCTGCTGCGCCTCAAGCAGTCGGCAGACCTGCATACCAATCGGATCGGGCAATGGCAGGC GTTGCAATGGCTGGGCAGCGACCATTACCAGGCGCATCTCGGACAGTTGCGCGAGTTCTACCGAGTCCGCCGCGATGCCATGCAGGCGGCGCTGACGGAG CACTTCAGCGATCTGGCGACCTGGGAGTTGCCGCAGGGCGGGCTGTTCTTCTGGTTGACGCTCAAGCAACCGCTTGACACGCGAACGCTGCTCAATCGGG CGCTGGCCGAGGATGTCGTGTTCATGCCCGGCGAGCCGTTCTTCGTCGAACCGGACGCGAACCCCGGCTATCTGAGGCTGAATTTCAGTCATGTCGCGGC TGAGCGCATGGACGAGGGACTACGCAGGCTGGCCCAGGTCATTCGCGACGCCGGTGCGTTGGAAGCTGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGTTATTGCCGGCCCGCGCCGCGGGTCGATCGGGAGGGGAGACCATGTTGAAAGTCTATGGCGATTATCGGTCGGGTAATTGCTACAAGATCAAGCTG ATGCTGCACCTGCTGGACCAGCCGTACGAGTGGATTGCGATCAATATCCTTCGAGGCGAGACGCGCTCGGAGGAGTTTCTCAAGAAGAATCCGAACGGCA AGATCCCGGTGCTGGAACTCGAGGACGGCTCCTGTCTATGGGAGTCCAACGCCATCCTGAACTACCTGGCCGAGGGCAGCGAGTTCCTTCCGACCGATCC GCGCCTGCGCACTCAGGTGCTGCAGTGGCAGTTCTTCGAGCAGTACAGTCACGAGCCGTTCATTGCCGTGGCGCGGTACATCAAGGTCTATCTGGGTATG CCGGAAGAGCGGCGTGAGGAATACGAGGCCAAGCAGCTCGACGGCTATCATGCCCTTAACGTGATGGAGCAACAGCTGCTGCGCACGCCGTATCTGGTGG
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| Amino Acid Sequence |
>aminotransferase
MEMAFSERITRLKSSLIREILAAAQRPEVMSFAGGLPAEAMLPAVDWAELPASMGQYGMSEGEPALREAIAAQARALGVPCEASQVLIVSGSQQTLDLAS KLFIDSGTEVLVEAPTYLAALQSFQLFGAQCLAVAQQADGPDLAALRSTLEQHAPAFAYLIPTFQNPSAVRYSEAKREAVAGLLDEYGVTLLEDEPYREL VFDQGSARPIVSRLKRASWIYTGTVSKTLLPGLRVGYLIASADLFPYLLRLKQSADLHTNRIGQWQALQWLGSDHYQAHLGQLREFYRVRRDAMQAALTE HFSDLATWELPQGGLFFWLTLKQPLDTRTLLNRALAEDVVFMPGEPFFVEPDANPGYLRLNFSHVAAERMDEGLRRLAQVIRDAGALEAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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