Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1241
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCCAGCTTGGCGGCGCAGACCGCTTGCGATGCCGATCTCCGACCGCGCAGCGGAAAATTCTGGGTTGCGTTCATACGCAAGGGACACGGCCCGCTCCAG TGTCAGACCGTCTTGCGCGCCCACCTCGAGCGACATTAGTGCCAGCCCGAGCCCAAGCAGCCCGCTAGCAAGCAGATACAAGCGTTTCTTTTGATACATA CGCAACACTGCAGTGCAGTGCCCCCTTCGTCGATAGCGTTTCCTCAGCCGCACTAAACCGGCCAGATAGCTGATGGCTAAGCGGCGTGACTTTAGATAAG CGCGGATATCGGCCGGGTGACTACGACATTACAAATTTGTAATCCAAGGAATATCTGCGATTGCACCGCTCAAGATTACGAGATCGTCATTTACCGCTAA TCCTGCGGTCATTTACAGGGGAAGATCATCGCCCGGCACTCGAACAAAAAGGCGAAGGCGTCATTCGAGCGCTGACATGCCGTATATCAGGAGCATCATC
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| DNA Sequence for Gene |
>PSTAB_1241
ATGAGCAAAAAGGCCGCCCTTTCACTTACAGCCCTTTCACTGGCACTGGGCAGCGCCCCGGTCTTTGCCCAATCGGAAACAGCGGAGGGCTTCATCGAAG GCAGCACGCTTTCGCTGATAAATCGCAACTTTTATTTCAACCGAGATTTTCGCGACGGTGGGAGCGCCACCGGCAATGGCTATTCTGAGGAATGGGCTCA CGGACTGATGGCATTCTTTGAGTCCGGATATACCCAAGGCTCGGTGGGGATCGGCGTCGACGCCTTCGCCATGCTCGGCCTCAAACTCGATTCTGGATCA GGACGTTCCGGTGCTGGCGGAACCGTCGATCTTCTCCCCTACAATAGCGCCGGCGATGCCGAGGATGACTTTTCTCGAGTAGGGGGGGCCGTGAAAGCAC GGTTCTTGGGCACCGAGATCAAGGCAGGCGATGTATTTCCCGCTACTCCTGTCGTGCACTTTGGTGACGCACGGCTGCTGCCGGAGTCTTTCAAGGGTGT CACCGTTGTGAACAACTCGCTGGACGACCTCACCCTCCAGGGCGGCCGCCTGCACGCGATGAGCCAGCCCAATACCAGCAACACGAACGATGACTTCGTC ACGTTTTATGGCGGCGGCGTCGACTCGCCTTGGCTCGGCTACGCAGGCGGCGACTATAGCGTGAACGAAAACCTCAGTCTTAGCCTGTATACCAGCCGGC TGAAGGATGCCTGGGATCAACATTATTTCGGTGTCTCGGCCACCTATCCACTTTCCGATGCCGTCGTGCTGCTGGGCAGCTTCAACTACTACAAGGCAAC CGACGAAGGTCGGAAATTGCTGGGCGAGTTTAACAACAGCATCTGGAGTTCCAGTCTGGGTGTCGCCTTCGGCGCGCACACCGTCACGGCGTCGTATCAG CGAAACAACGGTAACAACGACTTTGACTACTTGCGCCAAGCGGACTCGATCTACCTGAATAACTCCATCCAGTACAGTGATTTCAACTCACCTAAAGAGC AGTCCTGGATGCTGCGTTATGACCTGAACATGGCGGGTTACGGCATACCTGGGCTTACGTTCATGACTCGCTACGCCCGCGGCTGGGGCGCCGATTACAG CAACGCAAATGAGGTATATATGCGCCAAGACGATAACGGCGCGCCTCTGTCCGGACAGAAGCGCTGGGAACGCGACGTCGAAGCACGCTACGTTGTACAG ACAGGCTCGTTCAAGGACCTCTCTCTGCGGGTGCGCCAGGCTACAACACGGGCGACTGCTTTCGAGTCCGACCTCAATGAGGTTCGATTCATCGCCGAGT ACCCGCTCTCGATCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCACTACGAGCAACACCACATCTTCTTTTTGTGCTCCCTTGGTTTGAAGATGTGTTTCAGGCGCCCGTAGGGCGCCTTTTTTTGCTTAAGTGCACCTCC TTGCGCTGCGGGCCAACCAAATGACAGGTAGATTACAAATTTGCAAGACAGCCCCGCAGGACTTTTACCGCGTTAAAGTGCTTCCCGCTTCCCTAGGCTG ATCTTTACGGCCTGCCTTCCATGCTGGGCAAGCCGCGTTAGTCTTGGCCTAGTTGCTACATGAATAATTTTTTGGTTCCGCTTACCGCGCACCTCATTGC TGAGTCATCTGAAAACATGCGCATTCTGGTTGTAGAAGACGAGATTAAAGCTGCGGAATACCTGCAGCAGGGTCTCATCGAGTGTGGTTACACGGTCGAT TGCGTAAGTGATGGGCTCGATGGATTCCACCTGGCACTGCAGAACGACTATGACATCGTGCTGCTAGACGTGAATCTGCCAACCATGGACGGGTGGGAGG
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| Amino Acid Sequence |
>outer membrane porin
MSKKAALSLTALSLALGSAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDGGSATGNGYSEEWAHGLMAFFESGYTQGSVGIGVDAFAMLGLKLDSGS GRSGAGGTVDLLPYNSAGDAEDDFSRVGGAVKARFLGTEIKAGDVFPATPVVHFGDARLLPESFKGVTVVNNSLDDLTLQGGRLHAMSQPNTSNTNDDFV TFYGGGVDSPWLGYAGGDYSVNENLSLSLYTSRLKDAWDQHYFGVSATYPLSDAVVLLGSFNYYKATDEGRKLLGEFNNSIWSSSLGVAFGAHTVTASYQ RNNGNNDFDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAGYGIPGLTFMTRYARGWGADYSNANEVYMRQDDNGAPLSGQKRWERDVEARYVVQ TGSFKDLSLRVRQATTRATAFESDLNEVRFIAEYPLSIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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