Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1165 (pcaB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48557	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019619	3,4-dihydroxybenzoate catabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02426	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psz01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psz01220	Degradation of aromatic compounds	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psz00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psz01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00998	ADSL_C_2	IPR019468	Adenylosuccinate lyase C-terminal	366	445	2.8E-31
NCBIfam	TIGR02426	JCVI: 3-carboxy-cis,cis-muconate cycloisomerase	IPR012789	3-carboxy-cis,cis-muconate cycloisomerase-like	8	346	0.0
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	278	294	1.2E-11
Pfam	PF10397	Adenylosuccinate lyase C-terminus	IPR019468	Adenylosuccinate lyase C-terminal	367	444	7.3E-21
CDD	cd01597	pCLME	-	-	8	447	0.0
Pfam	PF00206	Lyase	IPR022761	Fumarate lyase, N-terminal	16	303	4.5E-68
Gene3D	G3DSA:1.10.40.30	-	-	-	365	452	1.6E-30
FunFam	G3DSA:1.10.40.30:FF:000007	Adenylosuccinate lyase	-	-	366	447	3.7E-23
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	143	163	1.2E-11
Gene3D	G3DSA:1.20.200.10	Fumarase/aspartase (Central domain)	-	-	2	361	1.5E-119
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	278	294	1.1E-25
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	233	260	1.1E-25
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	148	166	1.1E-25
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	102	124	1.2E-11
PANTHER	PTHR43172	ADENYLOSUCCINATE LYASE	-	-	6	451	2.1E-118
FunFam	G3DSA:1.20.200.10:FF:000014	3-carboxy-cis,cis-muconate cycloisomerase	-	-	1	363	0.0
SUPERFAMILY	SSF48557	L-aspartase-like	IPR008948	L-Aspartase-like	8	448	2.83E-124
PRINTS	PR00149	Fumarate lyase superfamily signature	IPR000362	Fumarate lyase family	103	121	1.1E-25
PRINTS	PR00145	Argininosuccinate lyase family signature	-	-	233	257	1.2E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.