Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GACCGTTGCCCGCCTGGAAAGTGCCGGGCCCGCCCACTGGCTCGATGGCCAGGCGCTGTTCAGCGGCATGTACCTCAACGAGCTGCTGATCCGCCTGCTG CCGGCGGAGGACGCGCACCCTGCACTGTTCGAGCATTACGTCGCGACTCTGCCGGCGCTGGCCGAGCACCGGCCGCTTGAGCCGTTGCTGCGGGCCTTCG AATGGCGACTGCTCGACGAGCTGGGCTATGGTTTTGCCCTCGACATCGATATCGCCGGTCAGCCGATCGACGCGCAGCGGCTGTATCGGCTGGTGCCGGA CGCCGGCCTGGAGCCGGTTGTGGGATTCCAGCCAGGGCTGTTCAATGGCGCGGAACTTCTCGCGATGGCCGAGGCCGACTGGCAGGTGCCGGGCGCGCTG GCCGCCGCCAAGCGGCTGATGCGCCAGGCTCTGGCTCCGCATCTGGGCGGCCGACCGCTGGTCAGCCGCGAACTGTTCATGAATCTGAAGGAGTCCCCGC
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DNA Sequence for Gene |
>PSTAB_1142
|pdxJ
GTGACTGAAGCCAATCGAATCCTGCTCGGTGTCAACGTCGACCATGTCGCCACCCTGCGCCAGGCCCGCGGCACCCGCTATCCGGACCCGGTCAAGGCCG CGCTGGACGCCGAAGAGGCAGGCGCGGACGGCATTACCGTGCACCTGCGCGAGGACCGTCGACATATCCAGGAACGCGATGTGCTGATGATGAAGGACGC CCTGCAGACGCGGATGAATTTCGAGATGGGTGTCACCGAGGCGATGCTGGCCTTTGCCGAGCAGCTGCGGCCGGAGCATGTCTGCCTGGTGCCGGAAACC CGCCAGGAGCTGACCACAGAGGGTGGGCTGGATGTCGCCGGCCAGGAGGCGCGCATTCGCGAGGCGGTGGAGCGGTTGCGCGGCTGCGGTGCGGAGGTCT CGCTGTTCATCGATGCCGATCCGCGGCAGATCGAGGCGGCGGCACGGGTCGGTGCGCCGACCATCGAACTGCACACCGGTCGCTATGCCGATGCTCACAG CGTGGCTGAACGTGCCTGCGAACTGGCGCGGATTCGCGACGGTGTCGAGGTCGGTCTCAGCCACGGGCTGATCGTCAATGCCGGGCATGGTCTGCACTAC CACAACGCCGAGGCCATCGCCGCCATCCGTGGTGTCAATGAGCTGAACATCGGTCACGCCATCGTCGCTCATGCGCTGTTCGTCGGCTTCAAGCAGGCGG TCAAGGAAATGAAGCATCTGATCCTCAGCGCCGCAGCGCGAGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAAGCCGTCCGCTGAAGGGCCCATTCGCGGTTCTCTCCGCGGGGACGGCGCTGCTCAGCGGCGGAACAGGTTGATCAGCACGGTCAGGACCAGGCTGA GAATCACCATCGAGGTGATCGGGATGAACACCCGGCTGCGTTCGGACTCGATGCGGATGTCGCCCGGTAGCCGGCCGAACCAGTTCAGCAGCCAGGGGAA GTAGTGCCAGGCGATGCCGAGCAGGAGCAGTACCGCCCCGGCGAGGATCATCCAGCGTGCCATGTCGGTTCCTCGCTGGCTTCCGGGCGATGGCCGCCAA AACGGCTGCGGTACTCGGCGAAGGCGGCAATCACCTGGGCGGCCAACACCTCGACCGCATCGCTGCGATTGCTTCCACGCAGCAGGTTGATCCGATAGTC GCCCAGTTGCGGTAGCCCGTACTGCCCGTCCAGCCGCTGCAGGGGCGGGCGGACCAGGCTCGCCGGGTAGGGCGCGATTGCCAGATCGGCGATCATCGCC
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTEANRILLGVNVDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLMMKDALQTRMNFEMGVTEAMLAFAEQLRPEHVCLVPET RQELTTEGGLDVAGQEARIREAVERLRGCGAEVSLFIDADPRQIEAAARVGAPTIELHTGRYADAHSVAERACELARIRDGVEVGLSHGLIVNAGHGLHY HNAEAIAAIRGVNELNIGHAIVAHALFVGFKQAVKEMKHLILSAAARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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