Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0636 (gabT)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCTGGTGGGCGGCGTCACTGCCGAGATGGCCGTGGCGCGCGAGGAAACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCCGCGATGAAGCCGAGGTG ATCCGCCAGGCCAACGACACCGAATTCGGCCTTGCCGCCTATTTCTACGCCCGCGACCTGAGCCGCGTGTTCCGCGTCGCCGAGGCGCTGGAGTACGGCA TGGTGGGCATCAACACCGGGGTGATCTCCACCGAGGTGGCGCCGTTCGGTGGCATGAAGACATCGGGCCTCGGACGTGAAGGCTCGAAGTACGGCCTGGA TGAATACGTGGAAATCAAATACCTGTGCCTGGGCGGCATCTGACCAAGCGGCTCAAATCAGGCGTGCAAAATAATGCACGGAGTTTTACTGTAATCCGAA CGCTCTGGATGGTGCGGCAGTCGATCATCGTATGCTGCCGCGCCCGCTTCCTGGCGTTCTTTCCGACCCGTGCCGACGATGAGCGGCTACCGAGGAGCTT
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| DNA Sequence for Gene |
>PSTAB_0636
|gabT
ATGAGCAAGACCAACGAATCCCTGATGCAACGCCGTGTCGCCGCTGTTCCCCGTGGCGTCGGCCAGATCCACCCGATCTTTGCCGACCACGCGAAGAACA GCAGCGTGGTGGATGTGGAGGGCCGCGAGTTCATCGATTTCGCCGGCGGCATCGCCGTGCTGAATACCGGCCACCTGCACCCGAAGATCGTCAAGGCGGT GGAAGACCAGCTGCACAAGCTCACCCACACCTGCTTCCAGGTGTTGGCCTACGAGCCGTACGTCGAGCTGTGCGAGAAGATCAACGCGCGGGTACCGGGT GATTTCGCCAAGAAGACTCTGCTGGTCACCACCGGCTCCGAGGCCGTGGAGAACGCGGTGAAGATCGCCCGCGCCGCCACCGGCCGTGCCGGCGTGATTG CCTTCACCGGCGCCTTTCACGGCCGCACCATGATGACCCTCGGTCTGACCGGCAAGGTCGCCCCGTACTCCGCCGGCATGGGCCTGATGCCCGGCGGGAT CTTCCGTGCGCAGTATCCCTGCGCGATCCATGGTGTCAGCGTCGATGACTCGATCGCGAGCATCGAGCGCATCTTCAAGAACGACGCCGAGCCGCGCGAC ATCGCCGCGATCATCGTCGAACCGGTGCAGGGCGAGGGCGGCTTCAATGTCGCGCCGAAGGATTTCATGGCCCGCCTGCGCGCGCTCTGCGACGAGCACG GCATCCTGCTGATCGCCGACGAGGTGCAGACCGGCGCCGGACGCACCGGCACCTTCTTCGCCATGGAGCAGATGGGCGTGGTTGCCGACCTGACCACCTT CGCCAAATCCGTCGGTGGTGGTTTCCCGATTGCTGGTGTCTGTGGCAAGGCCGAGATCATGGATGCCATCGCGCCCGGCGGGCTGGGCGGCACCTATGCC GGCAACCCGCTGTCCTGCGCGGCGGCGCTGGCGGTCATGGAAATCTTCGAGGAGGAGCATTTGCTCGACCGCTGCAAGGCGGTGGCGGAGAAGCTCACCG CCGGCCTCAAGGCGATCCAGGCCAAGCACAAGGAGATCGGCGAGGTGCGCGGCCTCGGCGCGATGATCGCCATCGAGCTGTTCGAGGATGGCGACCTGGC GCGACCGGCCGCGGCGCTGACGTCGCAGATCGTCGCCCGGGCGCGGGAGAAGGGCTTGATCCTGCTGTCCTGCGGTACCTACTACAACGTGCTGCGCGTG CTGGTGCCGCTGACCGTCGAGGACGAGCTGCTCGAGCGCGGCCTGGCCATCCTCGGCGAGTGTTTCGACGAGCTGACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGACCTGGCGCGCCGGCATTCGTGGCGGATGTCAGGCGCGCCGCAACCCTGACCCCTCGGGTACAATGCGCGGCATCTTGCCGTGCTACCCGAGGTCG TCATGCAGCCGTTCGCCATCGCCCCTTCGATTCTTTCCGCCAATTTCGCCCGCCTGGGCGAGGAAGTGGACAACGTGCTGGCCGCCGGCGCCGACATCGT CCATTTCGACGTGATGGACAACCACTACGTGCCCAACCTGACCATCGGCCCGATGGTCTGCTCGGCGCTGCGCAAGCATGGCGTCACCGCGCCCATCGAC GTGCACCTGATGGTCAAGCCGGTGGATCGCATGATCGGCGACTTCCTCGAGGCCGGCGCTACTTACATCACCTTCCACCCGGAAGCCTCGGAGCACATCG ACCGTTCGCTGCAGCTGATCAAGGACGGCGGCGCCAAGGCCGGTCTGGTGTTCAATCCGGCAACGCCGTTAGACGTGCTCAAGTACGTCATGGACAAGGT
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLMQRRVAAVPRGVGQIHPIFADHAKNSSVVDVEGREFIDFAGGIAVLNTGHLHPKIVKAVEDQLHKLTHTCFQVLAYEPYVELCEKINARVPG DFAKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAFHGRTMMTLGLTGKVAPYSAGMGLMPGGIFRAQYPCAIHGVSVDDSIASIERIFKNDAEPRD IAAIIVEPVQGEGGFNVAPKDFMARLRALCDEHGILLIADEVQTGAGRTGTFFAMEQMGVVADLTTFAKSVGGGFPIAGVCGKAEIMDAIAPGGLGGTYA GNPLSCAAALAVMEIFEEEHLLDRCKAVAEKLTAGLKAIQAKHKEIGEVRGLGAMIAIELFEDGDLARPAAALTSQIVARAREKGLILLSCGTYYNVLRV LVPLTVEDELLERGLAILGECFDELT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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