Strain | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCGCCGAAGACAACGCCTACCTCAGCCTCGACCCGCCGTATCGCAGCGCCGGCCGCCGGCTCCACGACCTCTCCGAGCTGCGCCTGCTGCTGGACATGC GCGAGGAGGATTTCCAGCGACTGGCGCCCTACGTGGCCGCGCTGCCGAGTGGCGTGCCATTGAACGTCAACACCGCCAGCGCGATGGTGCTCTCCAGCCT CAGCGACAACCTCAGCCTGGGTGCCGCCGAGTCGCTGGTCGAGCTGCGGCGCAGCGCGCCGTTTCGCAACAGCGCCGCCTTCCTCGCGCAGCCGGCCATG GCCGGAACCACGCTGCAGGGCACTGCGCTGGCGGTTGGCAGTCAATTCTTCCAGGCCACCAGCGAAGTGCGCCTGGGCGACCGCCGGCTGGCGCTGGTCA GCCTGCTGCAACGTGAGCAGGACGGCAGCGTCCGCGTGCTCGCGCGAAACCTCGGTCAGCCCGCCCGGCTGGCCTCACCGAACCGGAGCAGACCCTAACC
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DNA Sequence for Gene |
>PSTAB_0192
|xcpY
ATGGATTGCCTTTTCCTGCCCGCCGATTGCCCGGCCCGGCTCTACGCCGAGACCCGCGTGTACTGGCTGCCCAAGGATGAGCCCGGGCGCTGGCAAGCGC TGGGCGACTGCAGCGCGGCCGGCGCCATTAGCCTGATCCTGCCGACGGAGGTCTGCAGCTTCTTCGCCATCAGTCTGCCGACCCGCAAGGCGCGCTGGAT GCAGCAGGCGCTGGCCTATGCCGCCGAGGAACTGTTGGCCGAGAACGTCGACGAGCTGCATCTGGCCGTGGGCGAGACGCTCCCGGATGGCCGCCAGCGC GTCGTGGCGATCCGCCGCCAGCTGCTGGCCGGCTGGCTGGAGCAGTTGCGCGAACTGGGGCTGCTGATCGTGGCAATCCATGTCGACGCCGACCTGTTGC CGCGCGAGGCGACGCAGCTGCTATTCATCGGCGAGCGCGGCCTGCTCGGTGGCGAAGGCGAGACCCGGCTGGCCTTCGCCGCCGTGGACTGGCCGCAGCT CGCCACGCTCTGCCCGGCACCCTGGCACGCCCAGGGCAACGTGGCCGAGCCGCCGCTGGCACTGGACGACTATCGCCAGCTGGACGACCCCTATGCCTTT CTCGCCGCGCAGCGTGCGGCGGCACTCAACCTCGCCCAGGGCGATTTCGCGGTGGAGGTCGGCAATACCGGCCTCGGTTACTGGAAACCGCTGTTCGCAG TCGCCGGGCTGATCCTGCTGGTGCAGCTGGGCTTCAACCTGGGCCAGGCCTGGTACTTCCAGCGCCAAGGCGACGCCTACGCCGAGGCCAGCCTGGCGCT GTATCGCGAGCTGTTCCCGGAGGACATCCGCATCGTCAACATGCGCGCCCAGTTCGATGATCATCTGGCTCGCGGCAGCGGTGGACAGGCGGGCTTTCTG CGCCTGCTCGATCACGCCGCCGCGGCACTGGAAGACGGCATTCCGGTGACCATCGGCCAGCTCGACTACAACCAGGACCGCGGTGATCTGGCGCTGCAGG TGCAGGCGATGGACTTCGCCACCCTGGAAACCCTGCGCCGGCGCCTGGGCGATGCGGGGCAGAGTGTGCAGCTGGGCTCGGCCAGCCGCGAAGGTGATGG CGTCAGTGCGCGCGTGGTGATCGGAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGATGAATCTCAAGCAGCAACTGGCCGTACGTCTTGCCGACTCGCCGCTGTGGCAGCGCTGGCAACGCCTGGCGCCGCGCGAGCGCACCTCGCTGAGCCT GCTCGGCGCCTTTCTGCTCGCCGTGCTGTTCTACCTCTGGCTGTGGCTGCCGGCGCAGCGCCAGGCGGCCGAGGCGCGCGACTACTATCAGGCGCAGCGC GAGCTGCACGCCTACATGGAGCAGAACACCGAACTGGCGCGGCAGATGGAGCGCAGCAATCAGGTCGAACTGGCGCCCGAGCAGCTGCAGGGCGTGATCA CCGAAAGCGCGCAGCAGGGCAACCTGTCCATCGAGAGCTTCGACAACGGCAGCGACGGCAGCCTGCAGCTGAGCCTGCCCGGGGCCTCCTATGCCCTGCT GCTGCGCTGGTTCGACACCCTGCAGGGGCAGGGGGTGAGCGTCACCGAGGTCAGCCTGGAGCGCGCCGGCGAGGGGCTGGTCAACGCGCGGGTGAGCTTT
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Amino Acid Sequence |
>general secretion pathway protein L
MDCLFLPADCPARLYAETRVYWLPKDEPGRWQALGDCSAAGAISLILPTEVCSFFAISLPTRKARWMQQALAYAAEELLAENVDELHLAVGETLPDGRQR VVAIRRQLLAGWLEQLRELGLLIVAIHVDADLLPREATQLLFIGERGLLGGEGETRLAFAAVDWPQLATLCPAPWHAQGNVAEPPLALDDYRQLDDPYAF LAAQRAAALNLAQGDFAVEVGNTGLGYWKPLFAVAGLILLVQLGFNLGQAWYFQRQGDAYAEASLALYRELFPEDIRIVNMRAQFDDHLARGSGGQAGFL RLLDHAAAALEDGIPVTIGQLDYNQDRGDLALQVQAMDFATLETLRRRLGDAGQSVQLGSASREGDGVSARVVIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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