Pseudomonas stutzeri A1501, PST_4175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGGCTGTAGTCAGCGTGCGGCCG ACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAGGACGACGACATGGCTGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCT GTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCACCGGAGTCCCAGGCG CTGATTGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCACGGCATGACCT ACGCGGCTATCGCCACCGAACTGGGTGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTGATGCTGGTAGCGGAGGACTG
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| DNA Sequence for Gene |
>PST_4175
ATGGGCAGCGACTACCGCGTGTTGCAGCAGGCTGCCGAATGGTTCGCCCTGCTGCAGTCCGGCTCGGTCAGCGCCAGCGAGCGCCGCGCGTGGGCGGCAT GGCTGGAGCAGCCGGAACACGCCCAGGCGTGGGCGAAGGTCGAGCGCATCAGCGGCCAGTTTCAGCCGCTGACCAGCGACGCCATCGGCCGAGCCGCCGG GGCCATGCTGCAGCAACGGCAGTCGACCCGGCGGCAGGCGTTGAAGGTGCTCTCGGTGCTCTGCGGTGGCGCAGTCCTGACCGTCGCCGGCGGTGCGCTG CCCTGGCAGCGTTGGGCGGCCGATGAGCGCACCGCCGTCGGTGAGGTCCGTGATCTGCGCTTGGCCGATGGCACCCGGCTTTGGCTGAACACCGACTCGG CGCTGGATATCCGCTTCGACGCGAAGGAGCGAAGGCTGGCGCTGCGGCATGGCGAACTGCTGATCGACGCGCCCGCCAGCCGGCGCGGACGACCGCTGGT GCTGAGCAGTCGCGAGGGGCATGTGCGCAGCGAGCAGGCCGCGCGCTTTTCGCTGCGCCAGGAGGAAGGGCGCACGCGTCTCAGCGTGTTCGCTGGCGTC GTGGACATTCAACTCGAGGGTTTCGGCGTGACCAGCGTGCCTGCCGGCCAGCAGGCTGCGTTCGACCGTCGCCATGTCGGGCCGCTGGCTGCTGCGCGCG CCGAGCACCAGGCTTGGGCGACCGGGGTGCTGCTGGCCGACAACCAGCGTCTCGAGGACTTCCTCGCCGAACTGTCGCGCTATCGCCACGGCTACCTCGG TTGCGATCCACGGATCGCCGATCTGCGTGTGGTCGGGGCGTTCCCGCTGGCCGATACCGACCGTGTACTGCAAGCCCTTGCCGCTACGTTGCCTGTGCGC ATCGAGCGGCGCATGGCCTGGTGGGTCAGCCTGGAACCGTTGCCCAAGCAGGCAGGTGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAACGCTTACGCGAATAAAAAATATTCGCATCTGCAGTTCCCTTTCCGGATTCTCGCCGGGCATAGGACGAAACCCGTCATTCGAACAGGACTTCCCA TGCGCTCGACCGCCTTGCCCTTCCTTCCCGACCGTTCCCGTGCCCTGGCGCTGGGTATCCGCGCCGCGCTGCTGTGCCTGCCCCTGAGCATCGCTCCCGG CCTGGCCAACGCCCAGTCGACGACCCAGCAGGCGGTGCGCAGCTACGATATCCCCGCAGGCACGCTGTCCAGCGCGTTGAGCCGCTTTGCCGGCGAAGCG GGCGTGTTGCTGTCGGTTGACGGCAGCCTGGTGCAGGGCCTGGAAAGCAACGGGCTTAAGGGTCAGTACGGCGTCGATGAAGGTTTCGCCGCACTGCTGC AGGGCAGCGGTCTGCAGGCCGTGCGTGATGGCCAGGGCAACTATTCGCTGACTCGCCGCAGCGCGCAGAGCGATGCCGTCGAGCTGCAACCGATGACCGT
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| Amino Acid Sequence |
>transmembrane sensor
MGSDYRVLQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQAWAKVERISGQFQPLTSDAIGRAAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGAL PWQRWAADERTAVGEVRDLRLADGTRLWLNTDSALDIRFDAKERRLALRHGELLIDAPASRRGRPLVLSSREGHVRSEQAARFSLRQEEGRTRLSVFAGV VDIQLEGFGVTSVPAGQQAAFDRRHVGPLAAARAEHQAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVR IERRMAWWVSLEPLPKQAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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