Pseudomonas stutzeri A1501, PST_3532 (nirS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 12 141 7.74E-18
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 21 127 6.8E-23
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 37 120 4.2E-9
SUPERFAMILY SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily 129 560 9.29E-121
Pfam PF02239 Cytochrome D1 heme domain - - 157 555 0.0
Gene3D G3DSA:2.140.10.20 - IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily 129 560 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.