Pseudomonas stutzeri A1501, PST_3347

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015074 DNA integration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13683
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam NF033516 NCBIFAM: IS3 family transposase IPR048020 IS3 transposase 9 260 1.0E-65
Pfam PF13683 Integrase core domain IPR001584 Integrase, catalytic core 192 258 1.5E-23
Gene3D G3DSA:3.30.420.10 - IPR036397 Ribonuclease H superfamily 105 264 3.3E-32
PANTHER PTHR47515 LOW CALCIUM RESPONSE LOCUS PROTEIN T - - 6 260 5.7E-89
SUPERFAMILY SSF53098 Ribonuclease H-like IPR012337 Ribonuclease H-like superfamily 103 259 2.66E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.