Pseudomonas aeruginosa AZPAE13877, NQ45_RS08380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAGC GGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAGTGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGACG TCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAG CGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGAAGACGCGGCGGC CTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGTCCTTTCCTTGGAAAACCTTGCTTAACCTCGCCGGGCCCCTACCCGCCAAGGAGTAACGAT
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| DNA Sequence for Gene |
>NQ45_RS08380
ATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCCTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGGGGCTGGCGCTGG ACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCGTCGTCAATATCGCCACGCCCAACGGCGCCGGGCTGTCGAACAACCA TTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCCACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATCCTCGGCAACCCC AACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACCGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCGGGCAGTCGGCGC GGGTGATCGTCGCCAACCCGCACGGCATCACCTGCCAGGGCTGCGGCTTCATCAACACGCCGCGCGCGACCCTCACCACCGGCAAGCCGATCATGGACGG CCAGCGCCTGGAGCGCTTCCAGGTGGACGGCGGCGACATCGTCGTCGAAGGCGCCGAACTGAACGTCGGCAACCTCGAACAGTTCGACCTGATCACCCGC AGCGCCAAGCTCAACGCCAAGCTCTACGCGAAGAACCTCAACATCGTCACCGGCCGCAACGACGTCCAGGCCGACAGCCTGCAGGCCACGCCGCGCGCCG CCGATGGCAGCGAGAAGCCGCAGCTGGCGATCGACAGCTCGGCGCTGGGCGGGATGTACGCCGGGGCGATCCGCCTGGTCGGCACCGAGCAGGGCGTGGG GGTGCGGCTGGCCGGCGACATGGCCGCCAGCGGCGGCGACATCCGCATCGACGCCAGCGGCAAGCTGAGCCTGGCCCAGGCCTCCAGCCAGGGCGACCTG AAGATCGCGGCCCAGGCCGTGGAGCTGAATGGCAAGACCTACGCCGGCGGCAGCGCCGAGATCCGCAGCGCGGAGGAACTGGTCAACCGGCAGAGCCTGG CGGCGCGCGAACGCATCGCGCTGGAGGCGGCGCATATCGACAACGCCGGGGTGATCGAAGCCGGCGTCGAGCCAGACGAGCGGCGCAACGCGCGCGGCGA CCTCGAGCTGCGCAGCGGCACCCTGCGCAACGCCGGCAGCCTGGTGGCCAGCCGCGCGCTGGAAGCGAAGGCGAGCCAGGCGCTGGACAACCAGGGCGGC AGCCTGAAGGGGGCGACCGTCCGGGTCGACGCCGGGCACCTGGACAACCGTGGCGGCAAGCTGCTCGCCGAGGGCGAACTGCGGGTCGAGGCGAGCAGCC TGGACAACCGCCAGGACGGCCTGTTGCAGAGCCGGGACCGCGCCGTGGTCAAGACCCGTGGCGATCTCGACAACCGTGGCGGCCAGGTGATCGGCCTGAA CGACCTGGAGGTCGGCGCGGCGACGCTCGACAACGGCCAGCAAGGCCTGCTCGGCAGCCAGCAGTCCACCCGCGTCAGCGCCCAGGCGCTGGTCAACCGG GGGGACGGCGAAGTCTCCGGCAAGCGCGTCGAGGCTCGCGTCGGTAGCCTCGACAATCGCGGCGGCAAGCTGATCGGCGACGACCTGCTGGTGGTCGCCA GCGGTGCCATCGACAACCGCCTCGGCTTGTTCTCCGCAGCCAACCGCCTCGACCTGCGGGCGCGCAGCCTGGACAACAGCGGCAAGGGCACGCTGAGCAG CCGGGGCGGCCTGGAGGTCAGCCTCGGCGGCCTGCTGGACAACCGCGATGAAGGCAACCTGCTCAGCCAGGGCGCGCAGCGCGTGACGGTGGGGCAACTG GACAACCGCGCTGGCGGCCTGCTGTCGAGCCGCAGCGAGTTGAACGTCCACGGCGCCAGCCTGGACAACCGTGGCGGCGTGCTGGTGGCCGACGCCGGCC TGAGCGCCACGGGAGGCGCCTTCGACAACCGCGACGGCGGCAGCGCCAGCGGCAAGGCTGGCGTGCGCGTGGAGGTCGCCAGCCTGCGCAACGATCAGGG TGGCAAGCTGCTCAGCGATGGCCGCCTGGACCTCGCAGCGAACGCCGTCGGCAACGCCGGAGGGCGTATCGCCGCCAAGGGCGACCTGCAGGCGACGCTT GGCAGCCTGGCCCAGCAAGGTGGCGAACTGGTCAGCGAAAAGACCCTGAAGGTCGCGGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGA ATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGGCGGCGAGATTTCCAGCACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAA CCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGCAGCGCCTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGC CTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGTCGGCTCGACAGCCAGAACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCA GGCTGCTCAGCGATGCCGGTGTGACGCTGAAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAGGGCGCGGTGGATATCCGTACCGG CGTGCTGGACAACAGCCGCAACGGCGGCATCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGGCTGGACAACGGCCAGCAGGGCCGGGTCAGCGCC AAGGGCCTGCTCGACGCCAACCTGAAAGGCCTCGACCAGCGCGGAGGCGGCGTCCTGGTCAGCGAAACCGGCGTCACCCTCGACCTCAATGGCGGCACGC TGGTCAACCGCGACGGCGGCCTGATCGCCACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGCGCCGGCGGGGAAATCTCCAGCGA CCGCGCCTTCACCCTCGCCGCCGCCAGCCTGGACAACCGCGGCGGGCGCCTGATCGGCGCCGACAGCCTGACCCTGCGCATCGCCCAGGCCCTGGACAAC AGCCTGGGCGGGGTGATCTCCGGCGCCGCCGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCACCCTGGCCAGCCGCGCCGGCATCG ACCTGCGCGTCGATGGCGCGCTGGACAACCACGCCGAAGGCACCGTCTCCGGCGCCCGCCTGACGCTCGCCAGCGCCTCCCTGGACAACAGCGGCAAGGG CCTGCTCTCCGGCAACGCCGGCCTGAGCGTCGCCACTGGCGCGCTGGACAACGCCGAGGGTGGCCAACTGATCAGCCAGGGCGTCCTGGACGTCAGCAGC GCCGACCTCGACAACCGTGGCGGCGCCCTCAGTGGCAAGCAGTCGCTGCGCCTGAGCGCCGCCAACCTGGACAACCGTGGCGGCCTGCTCACCAGCGACG GCGAACTGGAACTGACGGCAGGGCGCGTCGATTCCGCCGACGGCGGCGAAATCTCCGCCCGGGGCGACCTGCGCCTGACGGTCGAGCGCCTGGTGCAACG CCAGGGCCGGCTGATTGGCGAGCGCGGCGTCAGTCTCGACCTGCGGGGCGGCGACCTGGACAACCAGGGCGGCCTGATCAGTGCCCGCGGCCCGCTGAGC ATCGAGCGGCTGAACGTCCTCGACAACCGCCAGGGCGGCGAGATTTCCAGCCAGCAGGGCTTCGAGCTGCTGGCCAGGCGCATCGACAACGGCCAGCAGG GGCGCATCATCAGCGCCGGGAAACTGCGCCTGGACGCCGACGCGCTGGGCAACGCCGGCGCCGGCCTGCTCTCCGGATGGCAGGGCCTGACGGTGACAGG CGGGAGCCTGGACAACAGCGCCGGCGGCACCCTTTCGAGCAAGGACGGCGAGCTGGCCATCAGCCTCGGCGGCGCGCTGGACAACCACGGCCAGGGCGCC CTGGTCAGCAAGGGCGCGCAACGGATCGACGCCGCCAGCCTGGATAACGCCCAGGGCATCGTCTCCGGCGAAAGCGACGTGACCCTGAGCATCGCCGGGA AGCTGGACAACGGCCAGGGCGGCCTGGTCTCGGCGCAGCGCGCGCTGAGCTTCGAGCGCGACGATACGCTGCTGAACAACGCCGGCGGCCGGATCAACGG CGGCAGCCTGCTGCTCAAGGGCGCCAGCCTGGATAACAGCGACGGCCAGTTGATCAGTCAGGGCCGGCTCGACGCCATCCTCGGCGGCGCCCTGGTCAAC ACCGGCGCGGCGCGCCTGGCCAGCGGCGGCGACCTGCTGCTGCGCAGCGCCAGCGTCGACAACCGCGGCGGCAAGCTGGTCAGCCAGGGGCTGCTGGAGA TCAGCGCCGGCAGCCTCGACAACAGCGCCTCCGGCACCCTCGCCAGCCAGGCCGGCATGAGCCTGCGCCTGGGCGGCGGCGCCCTGCGCAACCAGCAGGA CGGCCTGATCTTCAGCCAGGCCGGCGCCCTCGAGGTGCAGGCCGGCAGCCTGGACAACCGCCAGGGCACGCTCCAGGCCCAGGGCGACAACCGGCTGCGT ATCGGCGGCGCGCTGGACAACCAGGGCGGCCGCCTGGACAGCCGGGCCGGCAACCTCGACCTGCAGAGCGGCAGCCTCGACAACGGCGCCGGCGGCGTGC TCAACAGCGCCAAGGGTTGGCTGAAGCTGGTCACCGGGCTGTTCGACAACAGCGCCGGCGTCACCCAGGCGCAGTCGCTGGAAATCCGCGCCGGGAAAGG CGTACGCAACCAGCAGGGCCATCTCTCGGCGCTGGGCGGCGACAACCGCATCGTCACTGCCGACTTCGACAACCAGGGCGGCGGCCTCTACGCCAGCGGC CTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGTCAGGGCGGCAAGGTCGGCGCCGGGCGCATCGACTTCAGCCTGGCCGGCG CGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCGCCGCGATCGACAACAGCGGCGGCAGCCTGCGCGCCCTCGGCCG CAGCGGCAGCACGCGGCTGGTCGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGAAAGCGCCAACCAGGACCTCGACCTGCAACTGGGCAGCCTGGCC AACGCCGGTGGGCGCATCCTCCACACCGGCAATGGCACCTTCGGCCTGGATTCCGGGCAGGTGATCCGCGCCGGCGGCGAACTGACCACCAATGGCCTGC TGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGAACCTGGACATCGGCACCTTCCGCCAGACGGCCGAGGGCAAGCT GCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCTGGCCAGCGACGGCAGCTTGCGACTCGACCTGAGCGGCGGCTAC CGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCATGAACGCCGCCAGCCTCGACCTCGGCAACGCCGCCAGCCTCGCCGGCGGCGCCAATGTCA CGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGG CGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGATATCACC AATCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCGGGCAACCGTGCCGCCAGCCTGCGCAACCTTTCCGGGGTGATCG AGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTGTACACCGCGAAGATGGAGCAGAC CGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACAAGACCGAGGTCACCGCCAGCAGC GCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGTCTGATCGGCAGCGGCGGCAACCTCACCGCCA ACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGCGGCGATATCGGCGGCATCGATCA GAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATCCCCGCCGCGCTCAACGCGATCCTCAGC GACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCAACCAGTCCTACGCAGCGGTGATCCAGGCCGCCGGCGACGTCA CGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTGGGCGACAGCGCGGTGGGCGGCAG CGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTCACCCTGCCCGGCTTCAGCCTGCCCCAG GGCGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCCGGCGCCGACCGCACCCAGGGCGGTAGCG GCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCCGGTACCTGGCAGGGCCAGGGCGTGCGAGTCGACGGCCTGGCTGGCGCGGCCAACGTCCAGGG TCAGGGCGGCAGCACGCTCGGCGGCAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGAGCGCCAGCCACAAGTACCTGATC GAGACCAACCCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCAGCGGCCTGGGCATGAACCCGGACGATAGCAAGAAGCGCCTCG GCGACGGTCTCTATGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTGAGCAGCGACGAGGCACTGTTCCG CTACCTGATGGACAACGCCATCGCTTACAAGGACAAGCTCCAGCTGCAACTGGGCGTGGGTTTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATC GTGTGGTTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCACCCAACGGTGCGCTGA TCCAGGGCCGTGACGTGAAGCTGGTGAGCGGCGGCGACCTGCAGAACGTCGGCACCCTGCGCGCGCGGAACGACCTCTCGGCGACGGCCGACAACCTCGA CAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGCGACGTGAGC CTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAACGCAGCTTCGCCGACAGCG CCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAGCCTCGA CGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAACACGTCGCGACTACAGAGCGTGACCCAGCTCGGCGCCGAA GTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGC GCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCACCTACCAGGAAGACAAGGTCGCCCAGCAAGGCACCCG CGTGGATGCCGGGGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGCGACGAGGCCTACCTGGTGGCCGGC GACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCCGCAAGGAAACCCGGCGCGACGAAG TCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGACCTACCAGGGCGCGAAGCTGGAATC GGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGCACCAGGAAAGCCACGAGAAGAGCAAGGGCGACCTGGCG TGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATCGTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGA AGATCGACCTCAAGCATATCGACCAGAAGACCGTAAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCGTGGCTGAAGGAGGCCGAGCA GCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGCATGGGGCCGGCGACGCAGATCGCTGTCGCCATC GCGGCGGCAGCCATCGGTGGCATGGCGGCAGCGGGAGCGCTCAGTGGTGCAGGAGTGGGTGCCAGTAGCTTCGCCATGGGCGCAGGAGTTGGTGCGGCAG GAAGCCTGTCGGGCACGGCAGCGGTCAGCCTGATCAACAACAAGGGCGATCTCGGGAAGGTGCTGAAAGACAGCTTCAGTAGTGACAGTCTGAAGCAGAT TGCTATTGCGAGCCTGACCGGGGGGCTGACGGCTGAGTACTTCGACGGGATTCTTCAGACCAAGACTGATCCGCTTACTGGAAAGGTCACGGTAGACCTC AGCAGCCTATCTGGTGTTGGTCGCTTCGCTGCCAATCAGGCGATGCAGAACGCTACATCCACTGTACTGAGCCAGGCATTGGGCCAGGGCGGGAGCCTGA ACGAGGCGCTGAAGAGCGCGCTCTACAACAGTTTCGCGGCGGCAGGTTTCAACTTCGTCGGCGATATCGGCCAGGAATACAGCCTGAAGCCAGGCGATCC TTCGATGGTGACCATGCACGCCCTGATGGGTGGCCTGGCGGCGCAGGTCAGCGGCGGCGATTTCGCCACGGGCGCCGCGGCGGCTGGCGCCAATGAAGCG CTGGTGGCCAAGCTAGACCAGGCCTTCAAGAGCTTGAGCCCTGAGAACCGTGAAGCCATGGTCACTATGGGGTCGCAATTGGTTGGTGTTCTGGCTGCGG CGGTACGCGATCCTGATGTGACAGGCAAAGCTCTGGAAAGCGCTGCTTGGGTAGCGAAGAACTCGACGCAATACAACTTCCTCAACCATCAGGATGTGGC CGATCTGGATAATGCCTTGCAGAAATGCAAATCCCAGGGAAATTGCCGTCAGGTAGAGGAAGAGTTCAAGGCGCGTAGCGACGAGAACCGGCGGAGGTTG AATGGCTGCGTGGCTGTGGGTAATTGCGCGGAGATTCGTGCGGAGATCGATGCGGGGTCTACGGCTCTCAACGAGCTGGTGGCCCGGCAGGAAACAGCTA ATCCGGGAGGAAGTGACAGCGATATAGCCTACGGTTTCCTGATGGGCCGAAACGTCGTCGACTGGACGACGGCTGGTCAGTTGCACCTGGAGCAGACCGC CAACCTCTGGTGGAACGGCAATCCACAGTGGCAGAAGGAAGTCGGTGCATACCTGGACCAGACGGGGTTCAATCCGTTCGGAATCGGCGTTCCGGCAATG GGCGGTGCCGCTGGCAAGGTATCGGCCAAGGCGCTCATGAATGCGCTGAAGGCGGGAGAGTTGCCCAAAGGAGAGGTGGCCCCAGGAAAGGCTAATCTGC CTACCATTGGGGCGTTGGCGGATGCTGAGGCGGGGATGCCTTATACGCATCCGGTGAAAGAAGCAACTAAAACAAAAATACCAAATCCTCCTCGTGCAGA AGGGAACTTTACTGGTGGCCCCTTAGAAAATGCTATTAAGACTAGCGGTAGGTTTAAGCTAGATGGTGGGCCAGCCAATGGAGTGCTATATAGATCTGAT AATAAGGGGAATGTTACAAGTTATGCTGTATATGACTCGACTGGCATGATTATTAAAAGGGTCGATGTAAGCGGGGCTTCGCATGCAAACATACCCACGC CTCATGTAATAGAATATGGTAGAAATATATTGCCAGACGGAAGTGTTAGAGTACAATCTCCATCAACTAAATTAGCTCCGCGCCCTGCTAATTCGGATGA GATACCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAAAATAGTGTCTTTTAAAGATTTAAAGTGTTTGAGTAATTATGAGTTATGGAGGTCCGGCTGGGAGAATAAGAATGAGATTGATGTATTTTCATATAT TTCCTATGAAATCAGGCCAGAAGACTTATTGATCTTAGGGAAATTGGTTTTTCCTGATTTTATCTTGGATAGGGGGGCGGTAATACTGGAGATGAATTAT GAGGAAAAAAAATTTAATGACTGGATGGGAAGATTAGAAAATGATATCCAGTCTGTAGAGAGATTCATTAATCATACCCATATTTATGATATTTTTTCCG GGTGCAATGAGGATGTAGAAGATGAAATTTTTGAGCAGCTTGCTCATATGCTTTCTCTATCATGGCGCTTAATTTTAAAAGAGAAATTTCCAGATAGAGA TTTTTCGGTTTTGCTATCTTGCTCAGATCAAGATTATGGCCCTACTATTACTTTTTTTCAGAAATAAATATACTTTATTAAATAAAGAATAAATAAAGGG
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| Amino Acid Sequence |
>hemagglutinin
MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPVVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNP NLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITR SAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVRLAGDMAASGGDIRIDASGKLSLAQASSQGDL KIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIALEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGG SLKGATVRVDAGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNR GDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQL DNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATL GSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRGGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLS LDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGRLLSDAGVTLKGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSA KGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGADSLTLRIAQALDN SLGGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVATGALDNAEGGQLISQGVLDVSS ADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRLTVERLVQRQGRLIGERGVSLDLRGGDLDNQGGLISARGPLS IERLNVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGA LVSKGAQRIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVN TGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQAGMSLRLGGGALRNQQDGLIFSQAGALEVQAGSLDNRQGTLQAQGDNRLR IGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGKGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASG LLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLA NAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSLRLDLSGGY RGNGRATSLGDFAMNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDIT NLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASS AMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILS DWSFEYEFPSKGPTPISSGNQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQ GDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLI ETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAALTHDI VWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLQNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVS LTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWNTSRLQSVTQLGAE VSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLVAG DKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLHQESHEKSKGDLA WQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRMVQEVHDSWKYSNSGMGPATQIAVAI AAAAIGGMAAAGALSGAGVGASSFAMGAGVGAAGSLSGTAAVSLINNKGDLGKVLKDSFSSDSLKQIAIASLTGGLTAEYFDGILQTKTDPLTGKVTVDL SSLSGVGRFAANQAMQNATSTVLSQALGQGGSLNEALKSALYNSFAAAGFNFVGDIGQEYSLKPGDPSMVTMHALMGGLAAQVSGGDFATGAAAAGANEA LVAKLDQAFKSLSPENREAMVTMGSQLVGVLAAAVRDPDVTGKALESAAWVAKNSTQYNFLNHQDVADLDNALQKCKSQGNCRQVEEEFKARSDENRRRL NGCVAVGNCAEIRAEIDAGSTALNELVARQETANPGGSDSDIAYGFLMGRNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAM GGAAGKVSAKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKEATKTKIPNPPRAEGNFTGGPLENAIKTSGRFKLDGGPANGVLYRSD NKGNVTSYAVYDSTGMIIKRVDVSGASHANIPTPHVIEYGRNILPDGSVRVQSPSTKLAPRPANSDEIP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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