Pseudomonas aeruginosa AZPAE13877, NQ45_RS06220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCGCGATGGCCGTCCGCTGAGCTTCGCGATGCTCGACATCGACCACTTCAAGCAGGTCAACGACCGTTTCGGCCACCCCATGGGCGACCGGGTGATCA AGGGCCTGGCGCTGTTCCTCAAGCAACGCCTGCGCAAGACCGACCACATCGGCCGCTATGGCGGCGAAGAGTTCGCCGTGGTCCTTCCGGACACCGACCT GGACGCCGCGCGCCTGGTGCTCGACGAGATTCGCCAGCGCTTCGCCGAGATCCACTACCCGGCGCAACCGACCGACCTGCGCTGCACCTTCAGTTGCGGC ATCGCCGAGCTGACCCCGGACCTCGATATCAAGAGCATGGCCAAGCAGGCCGACGAAGCGCTGTACCGGGCCAAGCACGGCGGGCGCAACCGGATCGAGG TATATCGTCCCGACGCTCGATAATGGCCTTTTGTCATCAGCCGGTAACCGAACGGAAATAACCTGCGGTCTCGCCGTTCCGTAGTCGGACGAGACTCGCC
DNA Sequence for Gene
>NQ45_RS06220
ATGCGCCTCAAGCAACTCACCAACCTCAACACCCTGCTCCTGCTCACCGTCTGCCTCGCCCTGGGAATCACCCTGTGGTGGTCGCAACGCGCCATGGAGC GGCCCTTCCAGTTGCTCGACCAGTACCTGGAGCTGTCGCAGCGCTTCGACGAACAGGTCGCGCGCAACATCCGCCAGTACCTCGGCAGCGGCGACGCCGT GCGCCAGCAGGCCGCGCTGCAAGCCCTGGAAAGCCTCGCCGAGGCCTTGCCGGAGCTACCGCCGGACCTCGCCCGGACCCTCGCGCCAAGCCTCGCGGAG TTGCGCGAATTCAGCGCCGGCGACCTGCTCGCCGCCGGCAAGCTCGCCGGCGACCCGCAGGGCCTGCTGCTACAGGCCGAGCGCGACCTCACCGGCAACC TGGAACAATGGTCCGCCTACCTGGACGCCGCGGCGGGGCAGCCCCAGGCCGGCGCCTACCGCACCCCGCTGCTGCTCGCCAGCCTGCACCTGACCCGCCT CAGCCTGGCCCGCGCCAAGCTGGTGGAAAGCGCCAACCCGGCCCTGGCCGGCGACGTCGAGCGCGAATTGGCCAACCTGCGCGAGCAGGCCGGGCGGATC GAGGCCTTGCCGCTGCTCGGCGTGCTCGACGAGCAACGCTCGGCCAGCGACGACTTCGCCGCCATGATGGGGCTGGCCGGCGACGCCGAGGCTGGCGCCG GCAATGCCGAAGACCGCGGCGTGGCGCTGCGGCGCGAACTCGCCAGCCTGCTGCAACGCTATCCGGACGAGTTGCGCCGCACCCGCGACCTGATCGAGCG TCGCCAGCAACTGTCCGCCGACACCGGCGCCAGACTGGACGCGGTGCGCCAGGCCCTGGCCACCCTGGAACCGCAGGTGCGCGGCGAACGCCAGCGCCTG CAAGGCCAGGTACGCCTGATCCAGGGTGGGATGATCGCCCTGATCCTGCTCATCGCCCTCGCCATCGACAGCCTGCAAAGACGCCTGGCGCGGGTCCTCG GGCAACTGGTGCCGGCGCTCTCGGCCTGGGCCGACGGCGACTTCTCGCGCCCCATATCCCTGCGTACCCGCACCGAGGACCTGCGCAACCTGGAAGATTC GCTGAACCGCCTGCGCAGCTTCCTCGCCGAGCTGGTCGGCGCGATCCACCGCCGCGCCGAACAGGTCGCCGGCAGCAGCCAGACCCTGGCCGAGGTCAGC AGCGGCCTGCACGCCGGGGTCGAGCGCCAGGCCGGCGATACCGGGCAGATCCGCGACGCCCTCGGCGACATGGAAGCGGCGATCCAGCAGGTCGCCGGAG ACGCCAGCCAGACCGCCGACGCCAGTCGCAGCGCAGGCCAGGCAGTGGAGCATGGCCAGCGGGTGATCGGCGAGAGCCTGGGCGGCCTGCGCGAGCTGGT CGACGAGGTGCAAGGCAACGCCCAGTCGATCGAGCGCCTGGCCGAGGAGTCGGCGACCATCGGCAGCGTGCTGACGGTGATCCGCTCGATCGCCGAACAG ACCAACCTGCTCGCCCTCAATGCCGCCATCGAGGCCGCCCGCGCCGGCGACCAGGGCCGCGGCTTCGCCGTGGTCGCCGAGGAAGTCCGCTCGCTGGCCC AGCGCACCGCCGGCGCCACCGAGGAGATCCAGCAGCTCATCGGCCGCCTGCAACAGGCCGCGCGGCAATCGGTGGAGGCCATGCGCAGCCAGGTCGAGCA TGCCGAACGCACCGCCGAACAGGCCGGCGCGGCGGAAGGCGCGCTGGACGAAGTGGTCGCCGCGATCCATACCATCGGCGTGATGGCCGAACGCATCGCC GAAGGCTCGACCCAGCAGAGCCAGGCGGTCGGCGAGATTCGCTCGCACAGCGAACGCATCCACGCCCTGGGCGGGGAAAACCTGCGGCTGATCGGCCATA GCCGCGAACAGGGCGAGCAACTGCGGCAACTGGGCGGCGACCTGCGCACCACGGTGCAGGCCTTCCGCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGCGGCGACGTGCCGCAAGGCGCCAGAGGAACCGTCTGGCTTCGGACCGGTCGGATACCGCTCAGCGGAACCGGGGCAGGACCTGATCAGCCGCACG GGGCTCGATCGGGCCCGGCTTTCCGCTATCATTCCGGCTTTTGATCCGACGAGATATCCATGCGCCGCCTGCTGACCCTGATCCTCCTGCTGGTCGCCCT GCCCGCCGGCGCGGGCCTGTTCGACAGCCGTCCCGGCGCCTCCCTCGGCGGCGGCCTCGATGGCGGCGGCTTCCTCAAGGTCGACCAGGCGTTCAAGCCC AGCGTCGAGCGCAGCGACGCGCAGCACGTGCTGCTGCGCTTCGTCAACGCCGAGGGCTACTACCTCTACCGCCACCGCTTCCAGTTCAAGGTCGAGCCAG CCCAGGTCAGCCTCGGCCAGGTGCAGCTGCCGGCGGGCAAGCAGCACCACGACGAGTACTTCGGCGATACCGAGGTCTACTACAACATCGTCGACCTGAA
Amino Acid Sequence
>methyl-accepting chemotaxis protein
MRLKQLTNLNTLLLLTVCLALGITLWWSQRAMERPFQLLDQYLELSQRFDEQVARNIRQYLGSGDAVRQQAALQALESLAEALPELPPDLARTLAPSLAE LREFSAGDLLAAGKLAGDPQGLLLQAERDLTGNLEQWSAYLDAAAGQPQAGAYRTPLLLASLHLTRLSLARAKLVESANPALAGDVERELANLREQAGRI EALPLLGVLDEQRSASDDFAAMMGLAGDAEAGAGNAEDRGVALRRELASLLQRYPDELRRTRDLIERRQQLSADTGARLDAVRQALATLEPQVRGERQRL QGQVRLIQGGMIALILLIALAIDSLQRRLARVLGQLVPALSAWADGDFSRPISLRTRTEDLRNLEDSLNRLRSFLAELVGAIHRRAEQVAGSSQTLAEVS SGLHAGVERQAGDTGQIRDALGDMEAAIQQVAGDASQTADASRSAGQAVEHGQRVIGESLGGLRELVDEVQGNAQSIERLAEESATIGSVLTVIRSIAEQ TNLLALNAAIEAARAGDQGRGFAVVAEEVRSLAQRTAGATEEIQQLIGRLQQAARQSVEAMRSQVEHAERTAEQAGAAEGALDEVVAAIHTIGVMAERIA EGSTQQSQAVGEIRSHSERIHALGGENLRLIGHSREQGEQLRQLGGDLRTTVQAFRL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site