Pseudomonas stutzeri A1501, PST_2636 (lpxK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009029 tetraacyldisaccharide 4'-kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42724
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42724
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009245 lipid A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42724
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. IPR003758 Tetraacyldisaccharide 4'-kinase 6 331 38.283813
Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase IPR003758 Tetraacyldisaccharide 4'-kinase 19 326 5.6E-105
NCBIfam TIGR00682 JCVI: tetraacyldisaccharide 4'-kinase IPR003758 Tetraacyldisaccharide 4'-kinase 26 313 1.8E-75
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 51 192 6.15E-15
PANTHER PTHR42724 TETRAACYLDISACCHARIDE 4'-KINASE IPR003758 Tetraacyldisaccharide 4'-kinase 5 327 8.4E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.