Pseudomonas aeruginosa AZPAE13877, NQ45_RS29800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACCAGGCGGTGGACCACCTGCTGCTCACCGGGTGCGGCAGGCGTACCGACGTACGCTGGCAGGGCGGGCTGGCCGCGCACGTGCGGCGGCGCCTGGCC GACTACATCGAAAGCCACCTGGAGCAGCCGCTGGAACTGGGGTCGCTGGCGGAGCTGGCGGCGCTCTCCGAGTACCACTTCGCGCGCATGTTCCGCGTCT CCTTCGGCCTGCCGCCGCACCGCTACGTGCTGGAACGACGCCTGGCGCGGGCCCGCGACCTGCTGGCGTACTCCGCGCAGTCGCTCCAGGAGGTCTCGCT GGCCTGCGGCTTCGCCAGTCCGAGCCATTTCAACCGGCGCTTCCGCGAAGCCCATGGCGCCACCCCGGGGCAGTACCGCGCCGCCCTGAAAGGCTCCTGA AAGCCAGGCGCCGACAGCCTGCGGTTGTAGGCAGGCATTCCCGCAGCATAAAATGATAACTATTATCATTCGTTAATCCTTCTGCTCCGGGAATGTCCAG
DNA Sequence for Gene
>NQ45_RS29800
GTGTCGAGCGCCGACCTCGCCCATGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCTGCGGCGCCGCCTCGGCTGCC CGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGGCCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCAT CGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGACGTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAA GAGACCCGCGCCATCGTCCTGGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCGCAACGCTGCTACTTCGCCGA GCTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCGCCGCACCCAAGGTGCCGCCGCAGGTGGCTGAACAGGCCGTGCGCTGGCTGGTCGAGCTGCAGGGCGGCGCCGACGACGAACGCCTGCGCCA GGCCTGGCAGCGCTGGCGCCAGGCGGCCCCGGAACACGAGCAGGCCTGGCGCCACATCGAGGCGGTCAACCAGCGCCTGGCCGGGATAGGCACGCCACTG GCCCTGGCCGCCATCAACGCACCGCATTCGCCGCAACGCCGGCGCGCGCTGAAGACCCTGCTGCTGGTCCTGGCCGCCGGCGGCAGCGCCTGGGGCCTGC GCGAGAGCGGCAGCCTGCAGCGCTGGAGCGCCGACTATGCCACCGGCGTCGGCGAACGCCGGCGCCTGGCCCTGGCCGACGGCAGTCGCCTCGAGCTGAA CAGCGACACGGCGGTGGATGTCCGCTTCGATGCCGGCGAACGGCGCCTGCTCCTGCTGCGCGGGGAAATCCAGCTCAGCACCGGCCACGACCCGCGCCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSE ETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site