Strain | Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_39, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCTCCGTGGACGGCGGCGGGCACCTCACCTACCTGGCACCGACCCGCGTCAACCTCAGCCTGATGGAAGAACGCTGGCCGGACATCCGCTTCCGCGCGAC GCGCGAGCATCACTGATCGCACGGGAGGAGCCAGGAACAGCCTCCCTGTCTCCTCCCGCAGCGGTCTCGGCGCAGGGCGGATAACCGTATCGCGGCTATC CGTCGCTCCAGCGCGGTATCGGCGGACAGCCCCTGCGCAGGCAAAGCGAACGCGACGCTGTGCGAAACGCCTCCTTCCCTCCTCCCAGGCTCCCCTCCCC ATCGCGCCATCGCTCCGTACGCCTGCGCCTTTCGCAGGCGGGTGACGAGACTTCCAGGTAGGAAATCCCTTCAAGCGCAACCAGGCAAGGACGCGGTTGC CCAAGCCGTTTCCGAAGGTGCCTCCTGAGCAGTTCAGATAGGTTGTCCGCCCCCGACTGGCACGGCAGAGTGCCAGGGTTTATCTCATAGGGACTTGAGC
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DNA Sequence for Gene |
>NQ45_RS29775
ATGAGCGGCAAACCCGCTGCGCGCCTGGGCGATCCGACCGCGTGTCCGCTACCGGGCCACGGCAGCAACCCAATCGTCGGCGGCTCGCCCGACGTCTTCT TCGACCATCGGTCCGCCGCCCGCCAGGGCGACGCCACCGCCTGCGGCGCCACCCTCAGCGCCAACGTCATCGCCAACGTACTGATCAATGGCAAGCCCGC CACCGTGGTAGGTAGCGTCGGCACCCACGGCGACCTGGTGGTCGGCGGGGCGGGCACGGTGCTGATCGGCAACAGCGGCGGCGGCGCACCCGCTCTCGCC CTCGCCCTCGCCCCACCGAAGCTGTGCCTGCAATGCCTGCTGCTGGCGGCACGCCGCAACCAGGCCCTGGTGCCCCTGGAAAGCCTCGGCGGCGCACCGT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCTCCAGCCGGCGCTCGCGGCGCCTACGCCGGACAGCCGCCTGTTCGCCCTGGCGGACGGCGCCCGCTACCTGACCCTGGACACCCGCCTGGAAAA GGCCGCGGGGGAAATCCGCTCGCGCTGGCTGCTGGCCGGGAGCGAGCTGGACGAAATCGCCCATGCCGGGCCGGTCCTGATCGAATTCATGGACAGCGCC CCGCTTTCGTCATCGGGCGAGTTCCTCGGCTGGCTGCGCGACTGGGACCGCCGCTCGCCCATGGCCTCCTGGCTGTGGAGCCGGGCGTCCTTCGAAAACC TCGCGAAACACTTCGCCGGGCTGCTCTTCACCCGCATGCCCGACGGCCGCCGGGCGCTGTTGCGCTACTACAGCCCGGAAGTGCGCCGGGCGCTGGAACA GGTCATGACCGCGCGGCAATGGACGCAAGTGATGGCGCCGCTGGAGCGTTGGCAGGTCTGGCAGCCCCTGCAGGGCGGCTACCTCGTCTATGACCGGGAA
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Amino Acid Sequence |
>hypothetical protein
MSGKPAARLGDPTACPLPGHGSNPIVGGSPDVFFDHRSAARQGDATACGATLSANVIANVLINGKPATVVGSVGTHGDLVVGGAGTVLIGNSGGGAPALA LALAPPKLCLQCLLLAARRNQALVPLESLGGAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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