Strain | Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCACGTTTCCAGGAGGCCACAAGGATGCCTGCAATACCCCTGCGCGCCATGGTGCTGTGCGCCAACCCCGGCCGTCTGCTCAGGTACGGAGCGCTGTT CAACCGCTGCGGCTACTTCCACCTGAGCCTGTGCCTGGACCGACGGGAGCTGCGGCGCTCCCTGGACCAGGGTTACCCGTACGACTATTGCCTCTACGAC GGATTCCGCCTGGACCAGGGCTGCAAGGGCACGCTGGCGATGCTGGGACGCAGCGGCAGCATCCGGCGCTTCCTGCTGGTGGGCGAACTCGATTGCCGCG AGAAGCGTCTGTTGTTCGAGTGGAGCAGAGGCCATGGCCTGAGCATCGGCGCGGTGTCCGACCGGCCTTTGGGCCAGGTCGCCCTGGCTGCGTTGATCAA GCGTGATCGCGGCTGCCCCGACCTCCTGCGCGGCATCGCCTGAGGCGGCTTCCGGGAAGATGAGGTAAGGTCGTTTTCCAACCTTCCATGGCGAGACAGC
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DNA Sequence for Gene |
>NQ45_RS24130
ATGACCGTCCAGGCCGACATCCTCAAGGCGATCGAAGGCATCGAGCATGGCTTCCAGCAAGCCGGCCAGGCACTCTCCGAACGGATATTCCATTGCCGGC AGGTGCATGGCGCCGAGATCGTCGACGCGCGCTCGTTGTCGGAATCGGGACGGCATGCCGCCGACGGTGTTTTCAGCGAAGGGCCGCTGGCGGTCGCGGT GGTCACCGCGGACTGCCTGCCGATTCTCATGAGCAGTCGCGACGGTCGGGTGGTGGCCGCCCTGCACGGCGGCTGGCAGGGGCTCGTCGCCAGTATCGTC GGCGCGGCGGTGGCGCGCTTCAATGCGCGCGGCGTCGCCAGCGCGGACATCCGGGTCGCCATCGGTCCCGGGATCAAAGCCTGCTGCTACGAGGTGAGTG CCGGGTTCATCGAGGCGTTGCAGGTCGGCCACGGCCGCCTCTGGGAGGGCGCGGTGCCGCCCTGGAGCCAGCGTCGTCCGCTCCCCGAGCGGCCACCCCG GTTCGCTCCGCCCGAGCCAAGGCAGGCGGAGCAGGGCGCCTGGCTGGACCTGGTAGCCTTCTGTCGCCAGTTGTTCCAGGCCGCCGGCGTCGGGCCGGCG CAGATCGAAGCCAGCGCCGTCTGCACCTACTGTTCCGGCGATGCGTTCGCCAGTCATCGCCGACGCCAGCGCCTGGGCGAGGAGAAGCGTCAGCAGTACG CCTGGATCGCGCGCAAGCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCGTATCGGTATTGTCCGGAAATCCTGGATAGTCATGACGGTTGTCTGCTGTTTATCCGCCAATACCCGGCTTCTAGACTTTCCCTGTCGATGCGTGG CTGTCGCCACGCTCATTCCAGGAGAGTCCCAGCATGCCTGACATCACCCAAGCCGCCATCGTCACCGGCGCCTCCCGCGGCATCGGTCGCGCCATTGCCC GGCGGTTGGCCGCCGACGGTTTCGCGGTCGCGGTCAACTATGCCGGCAACCAGACCATGGCCGACGAGGTCGTGGCCGAAATCGTCGCCGCCGGCGGCAC GGCCATCGCCGTACAGGGCGACGTGGCCAGCCCGGAGGACATGGACAAGCTGTTCGAAGCCACCAGGGGCGCCTTCGGCCGCATCGACGTGGTGGTCAAC AGCGCCGGCACGATGCCCTACCTGAAGATCGCCGACGGCGACCTGGAGGGCTTCGACCGGGTGATCCGCACCAACCTGCGCGGCGCCTTCATCGTGCTCG
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Amino Acid Sequence |
>COG1496: Uncharacterized conserved protein
MTVQADILKAIEGIEHGFQQAGQALSERIFHCRQVHGAEIVDARSLSESGRHAADGVFSEGPLAVAVVTADCLPILMSSRDGRVVAALHGGWQGLVASIV GAAVARFNARGVASADIRVAIGPGIKACCYEVSAGFIEALQVGHGRLWEGAVPPWSQRRPLPERPPRFAPPEPRQAEQGAWLDLVAFCRQLFQAAGVGPA QIEASAVCTYCSGDAFASHRRRQRLGEEKRQQYAWIARKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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