Pseudomonas aeruginosa AZPAE13877, NQ45_RS21200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_22, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTACTCCTACTTCATGAATACCCTCTACGACGACGAGGCGGAAAGCGAAGCGCTGATGGAACTGGCGCGAAGCAAGGTCGGCAATGTCGCCATCGCCA ACTCGGATGCGGCCTGGGATGCCTACGCCCATGCCGCCATCGACCAGGCGGTGCGGGCAGTCCGCGAACTGGGTTGAAGGACGGCGACGGCAGCGGAACC CGCGCTGCCGTCGCGCCCTTCCGATGTCCAGCAAGACTGACAGAAATGTACTGACAGCGATTTCAACCCCTACTCCACGAAAGCCGTTCAAAGACCCTAT GTTTCTCGGCCTCCCCTCGAAATAACCTAGGGAAAACACATAGGAAATTTCCTACTAGCATTCAGAAAAGTCCTGATTAAACCGACAGACACCATCGCTA GAATTCGAGCCCGTCCGGAGCTGCCTCCTGGCGGATTATCCGCCTGCCGGCGTTGCCGGTAGCCGCTGCGGAAACCCCCACCTCGATCGGGTTCGATTTC
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| DNA Sequence for Gene |
>NQ45_RS21200
ATGAAAACACGCGTCATCCTCGTCGACGACCACGCCCTCACCCTGATCGGCATGCGCTATCTGCTGAGTGCGTACGACGACCTGCGGATCGTCGCCCAGG CCCAGGACGCCGATGGCTTGCTGGCGCAGCTCGAAGCGCACCCCTGCGACCTGCTGATCACCGACCTGATGATGCCCGGCAGCCAGCAGGCCGACGGCTT GCGCCTGGTGCAGAAGGTCCGGCGGCGCTATCCGGACCTGCCGATCATCGTCGTCACCATGCTCGGCAACCCGGCACTCGTTTCATCCCTGCTCAAGCTG GGCATTCACGGCCTGGTGAGCAAACGCGGCATGCTCGACGATCTGCCCAAGGCAATCCGCCACGCCGGCCGTCGACCATTCATCTCGCGCTCCATCGCAC ACCTGCTGGAAGTGGGCGAAGCCGAGCACGGCAAGCCGCTGGCCAGCCTCGAACAACTCACCCCGCGCGAAGTGGAAGTGCTGCGCCTGTACGGCAGCGG CCTGGCGGTCGGGGAAATCGCCATCCGACTGTGCCGCAGCAAGCAGACCATCAGCGCGCAAAAGAGCAGCGCCATGCGCAAGCTTGGCCTGGACAGCAAT GCCGGACTCTTTATCTACATCCGGGAAAACGGCCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGCGGCCGCGATATGTCCGCCCCGCCAGCCCGCTTCGCAAGGTCCGCGCAGCCGCTAGAATGTCCCGCAGCGCCGGGCGTCTTCCGTGCCCGCCTC CACCAAAGGACTCTTTTCACATGGACCGTAACCGCCGCCTCTCCGCCCGACTCTGCCTCCTGCTGCTGGGACTCGCCAGCCAGGCCGAAGCCCGCGAACC GCAGCCCTGCGCGTCGCGACTGCTTGACGCCGTAGCCAGGCAGGTCGGCCACGATGGCTGGATAGCCCCTTCGTACGAATCTTCCGGTCCGTTCCTCGCC GTGGCCTGCAAGCCCTGGCCGGACGACCCCGCGCAGACGGTGATCGCCATGGCCTACCTGGATCCGGGCGACACCGCCGTGGAAGGCGAACGCCACCCGC ATCTGCTATTGGCCAAGGCCGACAGCCGCAGCGGCAGGCTGCTCGAACGCTACGACAGCGACTTCGAAGAAGACGCCTCCGTCGCCGTCGGCAGCGACAG
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| Amino Acid Sequence |
>LuxR family transcriptional regulator
MKTRVILVDDHALTLIGMRYLLSAYDDLRIVAQAQDADGLLAQLEAHPCDLLITDLMMPGSQQADGLRLVQKVRRRYPDLPIIVVTMLGNPALVSSLLKL GIHGLVSKRGMLDDLPKAIRHAGRRPFISRSIAHLLEVGEAEHGKPLASLEQLTPREVEVLRLYGSGLAVGEIAIRLCRSKQTISAQKSSAMRKLGLDSN AGLFIYIRENGLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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