Pseudomonas aeruginosa AZPAE13877, NQ45_RS17845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa AZPAE13877
GCF_000795665.1|latest
Locus Tag
NQ45_RS17845
Name
Replicon contig_16
Genomic location 196170 - 197348 (+ strand)
Partial sequence -> 3' end.

Cross-References

RefSeq WP_034031734.1
GI 730506130
NCBI Locus Tag NQ45_RS17845

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -13.28
Kyte-Doolittle Hydrophobicity Value -0.389
Molecular Weight (kDa) 42.4
Isoelectric Point (pI) 4.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2ODJ MEMBRANE PROTEIN 12/22/06 Crystal structure of the outer membrane protein OprD from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.9 X-RAY DIFFRACTION 93.1
3SY7 MEMBRANE PROTEIN 07/15/11 Improved crystal structure of Pseudomonas aeruginosa OprD Pseudomonas aeruginosa 2.15 X-RAY DIFFRACTION 92.9
4FOZ PROTEIN TRANSPORT 06/21/12 Crystal Structure of OccD1 (OprD) Y282R/D307H Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 92.6

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000187 (1579 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NQ45_RS17845
Search term: porin

Human Homologs

References

No references are associated with this feature.