Pseudomonas aeruginosa AZPAE13877, NQ45_RS11470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGCAGGCGGTCGGGGTCGTCCTGGATGTCCTGCAGGGCCACCGCCTTGGGACAGACATGGCCGCGGCTGAAGCTGTCCTGCGGGTCGCCCTTGATCGA GCGGATCCGCGGCACGCCGCCCTCGTCGCTCTCGGTCTCGATGGCGAGCCCGCAGATGGCCTCGCAGAGATGGCACGCACGGTAGTGGAGGGTCTTGCTC ATGGCTCGCCTCTTCATTGTCGTCGCCGGCCGTCGCGGCCCGGCGCGTACGCGAGGACCAGACGACCGGTCTAGTCGTCGAATCGGCACTATGCGGCGCC TTCCGCCGCCGCGCCAGCAGCGTCAGTCGGCTGAATCGCCAGGCATCAGGCTGGCCGATGGGCGCGGTAGAGGGGAGGCGTGCCGTTTGTCCGGCTGTCA ACTATCCACCTGGGAATTCCGGCGCGGCGAAAGCCGGTGCTAAACCTTGTCTCTTCGAGTCCACCCCTGTCCGACAAGACCAATAAAGCGTGGAGACCGC
DNA Sequence for Gene
>NQ45_RS11470
ATGACCGACGACCACTCCTTCCGCCCTCGCCCCACCTCGTTGTCAGCCGCCCTGCTGCTGGGCGCCTGGATCGCACAGCCGGCCACGGCCGCCTATGTCG AAGCCGGTCGGCCCGGCGATCCGGCCAGTTGGCGCTCCGCCGAATACCAGCAGGACTGGGGCCTGGAACGGATGCGGGCCGACCAGGCCTATGCCGCCGG CATCGACGGCCAGGGCGTGAAGATCGGCGAGATGGACTCCGGTTTCGACCCGAGCCATCCGGATACTCCCGCCTCGCGCTACCAGCCGGTGACGGCCAGC GGCACCTATGTCGACGGCACGCCGTTCAGCGTCAGCGGCGCGATGAACGGCAACAACGACTCCCACGGTACCCACGTCGGCGGCACCCTCGGCGCCTCGC GCGACGGCGTCGGCATGCACGGGGTGGCCTACGCGGCACAGGTATATGTCGCCAACACCAACCAGAACGACAGCTTCCTGTTCGGCCCGACGCCCGACCC GAACTATTTCAAGGCCGCCTACCAGGCGCTGGCCGACGCCGGGGTGCGGGCGATCAACAACAGTTGGGGCAGCCAGCCCAAGGACGTCAGCTACGAGACC CTCGACGGCCTGCACGCCGCCTATGCCCAGCACTACGGGCGCTCCACCTGGCTGGACGCCGCCGCCGGCGTCTCCCGCCAGGGCGTGATCAACGTCTTCA GCGCCGGCAACAGCGGCTACGCCAACGCCAGCGTGCGCTCCGCCCTGCCCTACTTCCAGCCGGACCTGGAAGGCCACTGGCTGGCCGTGTCCGGCCTCGA CCAACAGAACGGCCAGCGCTACAACCGCTGCGGCATCGCCAAGTACTGGTGCATCACCACGCCCGGCCGCCTGATCAACAGCACCATGCCCGGCGGCGGC TACGCCAACAAGTCCGGTACCTCGATGGCCGCGCCCCACGCCACCGGCGCGCTGGCCCTGGTCATGCAGCGCTATCCGTACCTGAACAACGAGCAGGCGC TGCAGGTTCTGCTGACCACCGCCACCCAGCTCGACGGCACGCCGACCGGCGCCCCCACCGACACCGTCGGCTGGGGCGTGCCGGATCTCGGTCGGGCGAT GCATGGGCCTGGACAATTGCTCGGCCGCTTCGAGGCCAACCTCCCGGCCGGCCTGCGCGACGAATGGAGCAACCCGATTTCCGATAGCGCCCTGCTCCAG CGCCAGGCCGAGGACGCCGCCGAGCACGCGGCCTGGCAGCGGACGCTGAAGGACAAGGGCTGGGAAAACGGCTTGCCGGCCGGTGCCAGCCAGCAGGAAC GCACCGACTATGCCATCGGCATGGCCCGCGACCAGGCCGCCGCCCAGCGCCAGTACCAGGGCAGCCTGGTCAAGGCCGGTGCCGGCAGCCTGGTCCTGAG CGGCGACAGCACCTATCGCGGGCCGACCCTGGTCGATGGCGGGCTGCTCAGCGTCGACGGTTCGCTGCTGTCCGCCGTCGAAGTCAATGCCGGCGGCACC CTCGGCGGCAGCGGCAGGATCGGCGGCCTGCTGGCGCGCTCCGGCGGCACGGTGGCCGCGGGCAACTCCATCGGCACCCTGGAGGTCGCCGGGGACCTGC GCTTCGAATCCGGCTCGACCTACGCGGTGGAGCTTTCGGAAAGCGCCAGCGACCGGATCGTCGCCAGCGGCAAGGCGAGCATCGCGGGCGGCAACGTCAC CCTGGCCATGGAAAACAGCCCCGACCTGCTCAGCCAGTCCCAGGTCGAGAGCCTGGTCGGCCGCCGCTACGACATCCTCGACGCCGCCGGCGGCATCGAC GGGCGCTTCGACGCGGTATTGCCGAACTACCTGTTCCTCGGCGGCACCCTGGACTACGCGGCCAACGCCATCCGCCTGGATATCGGACGCAACGGCACGA CCCTCGCCAGCGTCGCGCAGACGCCCAACCAGGCGGCGGTCGCTGGGGCCGTGGAAACGCTCGGCGCCGGCAACCCGGTCTACGAAAGCCTGCTCCTGTC GGAAAACGCCGCAACCGCCCAACGGGCCTTCCAGCAATTGTCCGGGGAAATCTACCCGGCGCTCGCCGGCCTGTTGCTCAACGACAGCCGCTATCTGCGC GACAGCGTCGGCGAACGCCTGCGCCAGACCAGCGACGGCGAGGCCGGCGGAGAGGCTCCCGAAGGCTGGTTCAAGGCGCTCGGCTCCTGGGGCAAGAGCG CCGATGGCAGCCACGGTAGCGAAGGCTACCGGCATTCGGTCGGCGGCTTCCTGCTCGGCGTCGACAGCCAGGTCGCCAGCGACACGCGCCTCGGCCTGGT GGCCGGCTACAGCAACAGCTCGCTGAACATGGACAGCAGCCTGCAATCCTCCGCCAGCATCGACAGCTACCACCTCGGCGCCTACCTCGGCCGGCAATTG CAGCAATGGCGCCTGAGCCTCGGCGCAGCGCACGCCTGGCACCGCGCCGAGGTCAAGCGCGACCTGCAATACGGCGCCGTGGCCGGCAAGCAGAAGGCCA AGCTCGACGCACAGAGCAGCCAGTTGTTCGCCGAGGCCGCCTACGCGCTGGGTTGGCGCAGCCTGGAGCTGGAACCCTTCGCCGGGCTGGCCTACGTGCA CGTCGCCAGCGATGACTTCCGCGAACGCGGTAGCGCCGCGGCCCTGGAGGGTGGCGACGACAACCTGGACGCCGCCTTCACCACCCTGGGCCTGCGCGCG AAACGGCATTTCGAGCTGGATGCCGGACGCCGCCTGGCGCTCTCCGGCACCCTCGGCTGGCGCCACAACCTGAGCGACACCACCCCGCAACGGCACCTGG CGTTCGCCAGCGGCAGCCAGCCATTCAGCGTGGAAAGCGTGGCCCTGTCCCGCGACGCCGCGCTGCTCGGCGTCGACGCCAGCCTCGCGGTGAATCGCGA AGTGAGCGTGCGGCTGGGCTACAACGGCCTGCTGGGCAGCCGCGAGAAGGACCATGGCGTCGGACTGGCCGTCGACTGGCGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTCGGTTACGAGGGCATGCCAGCCGTTGGATGGGTTCCGGCGGGCGGCAAGGGGAAAAAGCCACTTCATTGCCCTCGGTCACGAAACCGCTGCAAATAT GAGAAAAAGACCTAACTAAAGGATTCATGCGAAATGCATAGCGCTATACTGTCCATCCAGCGCTGTACTATCCCTTCCAGCGCTGATCGCGACCCGGTGC CCGCACCACCGTGCCGCACGAGCCCCGGAGATCCGCACCTCCGGGGCTCACCTTTTGCTCCTCTCGCACCCTCCTTCCCCGGCTGAGCCCCTCCCCCTGC AAATCCGCGACGAATGGCCGCAATCCGGCAATCCGATGAACGAGCGGCCGAACGGCGGGCGCCCAGGCTGCCTGCGCACAGTCGCTGAACGGGTCAGGCC TGGCGGAAGAAGATCATGCCGAACAGCACCGCCAGGGCGCTGAGGAACGACAACCCGGTTTGCCCCAGGACCATCAGGATCGCGGCCGCCGCCGTGCTCA
Amino Acid Sequence
>membrane protein
MTDDHSFRPRPTSLSAALLLGAWIAQPATAAYVEAGRPGDPASWRSAEYQQDWGLERMRADQAYAAGIDGQGVKIGEMDSGFDPSHPDTPASRYQPVTAS GTYVDGTPFSVSGAMNGNNDSHGTHVGGTLGASRDGVGMHGVAYAAQVYVANTNQNDSFLFGPTPDPNYFKAAYQALADAGVRAINNSWGSQPKDVSYET LDGLHAAYAQHYGRSTWLDAAAGVSRQGVINVFSAGNSGYANASVRSALPYFQPDLEGHWLAVSGLDQQNGQRYNRCGIAKYWCITTPGRLINSTMPGGG YANKSGTSMAAPHATGALALVMQRYPYLNNEQALQVLLTTATQLDGTPTGAPTDTVGWGVPDLGRAMHGPGQLLGRFEANLPAGLRDEWSNPISDSALLQ RQAEDAAEHAAWQRTLKDKGWENGLPAGASQQERTDYAIGMARDQAAAQRQYQGSLVKAGAGSLVLSGDSTYRGPTLVDGGLLSVDGSLLSAVEVNAGGT LGGSGRIGGLLARSGGTVAAGNSIGTLEVAGDLRFESGSTYAVELSESASDRIVASGKASIAGGNVTLAMENSPDLLSQSQVESLVGRRYDILDAAGGID GRFDAVLPNYLFLGGTLDYAANAIRLDIGRNGTTLASVAQTPNQAAVAGAVETLGAGNPVYESLLLSENAATAQRAFQQLSGEIYPALAGLLLNDSRYLR DSVGERLRQTSDGEAGGEAPEGWFKALGSWGKSADGSHGSEGYRHSVGGFLLGVDSQVASDTRLGLVAGYSNSSLNMDSSLQSSASIDSYHLGAYLGRQL QQWRLSLGAAHAWHRAEVKRDLQYGAVAGKQKAKLDAQSSQLFAEAAYALGWRSLELEPFAGLAYVHVASDDFRERGSAAALEGGDDNLDAAFTTLGLRA KRHFELDAGRRLALSGTLGWRHNLSDTTPQRHLAFASGSQPFSVESVALSRDAALLGVDASLAVNREVSVRLGYNGLLGSREKDHGVGLAVDWRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site