Strain | Pseudomonas aeruginosa strain AZPAE13877 AZPAE13877_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTGAGAAGGCCACGGCAGGCGCCGAGGGTATCGAGCTGGCGCTGCGTAATACCGCCAATGGCGAACTGAGCGTGCAGCGCTACGACCTGGTAATCCTCG CCACCGGTTATGAGCGGCAGTTGCATCGTCAACTGCTGGAGCCGATGGCCGACTACCTCGGGGACTTCGAGGTCGACCGCAACTATCGTCTGATCACCGA CCAGCGTTGCCAGGCGTCGATCTACATGCAGGGCTTCTGCCAGGCCAGCCACGGCCTCAGCGACACCCTGCTGTCGGTGCTGCCGGTACGTGCCGAGGAA ATCTCCGGCTCCCTGTACCAGCACCTGAAGCCCGGCACTGCGGCCCGCGCCCTGCACGAGCACGCCCTGGCCAGCTGATCGGCGCCACGCCGCCACGCCC TGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCGTTTTCGTTGCATGTCCCGGCCGTTCCGGCCACCACTTTGCAGAGAAACGACATCG
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DNA Sequence for Gene |
>NQ45_RS00475
ATGGGGATGCGTACCGTACTGACCGGCCTGGCCGGCATGCTGTTGGGTTCGATGATGCCGGTCCAGGCCGATATGCCGCGGCCGACCGGGCTGGCCGCGG ACATCCGCTGGACCGCCTATGGCGTGCCGCACATCCGGGCCAAGGATGAGCGCGGCCTGGGCTACGGCATCGGCTACGCCTATGCGCGCGACAACGCCTG CCTGCTGGCCGAGGAGATCGTCACCGCGCGCGGCGAGCGGGCGCGCTATTTCGGCAGCGAGGGCAAGTCGTCGGCCGAGCTGGACAACCTGCCGTCCGAC ATCTTCTACGCCTGGCTCAACCAACCCGAGGCGCTGCAAGCCTTCTGGCAGGCGCAGACGCCCGCGGTACGCCAGTTGCTCGAAGGCTACGCCGCCGGTT TCAACCGCTTCCTCCGCGAGGCCGACGGCAAGACCACCAGTTGCCTTGGCCAGCCCTGGCTGCGGGCCATCGCGACCGATGACCTGCTGCGCCTGACCCG GCGCCTGCTGGTCGAAGGCGGGGTCGGCCAATTCGCCGACGCGCTGGTGGCCGCCGCGCCGCCCGGAGCGGAGAAGGTCGCCTTGAGCGGCGAGCAGGCG TTCCAGGTCGCCGAGCAGCGGCGCCAGCGCTTCCGCCTGGAGCGCGGCAGCAACGCCATTGCCGTTGGCAGCGAACGTTCGGCGGACGGCAAGGGCATGC TCCTGGCCAACCCGCACTTCCCCTGGAACGGCGCGATGCGTTTCTACCAGATGCACCTGACCATTCCCGGCCGGCTCGACGTGATGGGGGCCTCGCTGCC CGGTCTGCCGGTGGTCAACATCGGCTTCAGCCGCCACCTGGCCTGGACCCACACGGTGGATACCTCCAGCCACTTCACCCTGTATCGCCTGGCGCTGGAC CCGAAGGACCCGCGGCGCTACCTGGTCGACGGTCGTTCGCTGCCGCTGGAGGAGAAGTCCGTCGCGATCGAGGTGCGCGGCGCCGACGGCAAGCTGTCGC GCGTCGAGCACAAGGTCTACCAGTCGATCTACGGCCCGCTGGTGGTCTGGCCCGGCAAGCTGGACTGGAACCGCAGCGAGGCCTATGCGCTGCGTGACGC CAACCTGGAGAACACCCGGGTACTGCAACAGTGGTACTCGATCAACCAGGCCAGCGACGTCGCCGACCTGCGCCGGCGCGTCGAGGCGCTACAGGGGATC CCCTGGGTCAACACCCTGGCCGCGGACGAACAGGGCAACGCCCTGTACATGAACCAGTCGGTGGTGCCCTACCTGAAGCCGGAACTGATTCCCGCCTGCG CCATTCCGCAACTGGTCGCCGAAGGCCTGCCGGCCCTCCAGGGGCAGGACAGCCGCTGTGCCTGGAGTCGCGACCCGGCCGCGGCCCAGGCTGGCATCAC CCCGGCGGCGCAACTGCCGGTGCTGTTGCGCAGGGACTTCGTGCAGAACTCCAACGACAGCGCCTGGCTGACCAACCCGGCGAGCCCGCTGCAGGGCTTC TCGCCCCTGGTCAGCCAGGAGAAGCCCATCGGTCCGCGGGCGCGCTACGCCCTGAGCCGGCTACAGGGCAAGCAGCCGCTGGAGGCGAAGACGCTCGAGG AGATGGTCACCGCCAACCATGTCTTCAGCGCCGACCAGGTGCTGCCGGACCTGCTCCGCCTGTGCCGCGACAACCAGGGCGAGAAGTCCCTTGCCCGTGC CTGCGCGGCCCTGGCGCAGTGGGACCGTGGCGCCAACCTCGACAGCGGCAGCGGCTTCGTCTACTTCCAGCGCTTCATGCAACGCTTCGCCGAACTCGAC GGCGCGTGGAAGGAACCGTTCGATGCGCAACGTCCCCTGGATACGCCGCAAGGCATCGCCCTCGACCGGCCGCAGGTGGCGACCCAGGTGCGCCAGGCGC TGGCGGACGCGGCGGCGGAGGTGGAGAAGAGCGGGATTCCCGACGGCGCGCGCTGGGGCGACCTGCAAGTGAGCACCCGTGGCCAGGAACGCATCGCGAT TCCCGGCGGCGATGGCCATTTCGGGGTCTACAACGCGATCCAGAGCGTCCGCAAGGGCGACCACCTGGAGGTGGTCGGCGGCACCAGCTACATCCAGCTG GTGACCTTCCCCGAGGAAGGGCCCAAGGCTCGCGGGTTGCTGGCTTTCTCCCAGTCCAGCGATCCGCGCTCGCCGCACTACCGCGACCAGACCGAGCTGT TTTCCCGCCAGCAATGGCAGACCTTGCCGTTCAGCGACAGGCAGATCGACGCCGACCCGCAACTGCAACGGCTAAGCATTCGCGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAAGCAATGCCTATCAGATCTGATGGGAAAAAAACTGACGGTTTTTCCGCGCTCGTTCGTCTTTAACCATAGAGGCGGCCCACAGCCGCCCGGTTCCAGG GAACACGTGCAGGCAGCGAGCAGGGATGCTCGGCTTCGGCGGGGACCCGCTACCCACTCGTCCACGAAAGGAGCGTCACGATGACCCATTCGCCCGTCAA ACAGATGTTGAAGGAGGCCGGCCTGAAGATGAGCCTGGCCCGGCTGAAAGTGATCGATGCGCTCTGGGAAGCCTCGGGGGAGCAGGGCCGGGTGCCGATC CGCACCCTGCACCGGCGTCTCTCCGAAACCGGTACGCCGTTGTCCCTGGTGAGCATCCGCCAGGTCCTCGGGCGCCTGGTAGAAAGCGGCCTGGTGACCC TCGACGAACAGGATGTCTACAGCCCCGGCAAGGCTTCCTGGGGCGGTGCCGCCGGTTCCGCGGCGCCCGAGCGCCGCGCCGCGGCCAACGAGCAGCGGCT
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Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSD IFYAWLNQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGAEKVALSGEQA FQVAEQRRQRFRLERGSNAIAVGSERSADGKGMLLANPHFPWNGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALD PKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGI PWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPALQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRRDFVQNSNDSAWLTNPASPLQGF SPLVSQEKPIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAELD GAWKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQSVRKGDHLEVVGGTSYIQL VTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQTLPFSDRQIDADPQLQRLSIRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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